Sequence 1: | NP_066554.2 | Gene: | NEFH / 4744 | HGNCID: | 7737 | Length: | 1020 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001260974.1 | Gene: | LamC / 36615 | FlyBaseID: | FBgn0010397 | Length: | 640 | Species: | Drosophila melanogaster |
Alignment Length: | 554 | Identity: | 146/554 - (26%) |
---|---|---|---|
Similarity: | 229/554 - (41%) | Gaps: | 150/554 - (27%) |
- Green bases have known domain annotations that are detailed below.
Human 51 TRTSVSSVSASPSRFRGAGAASSTDSLDTLSNGPEGCMVAVATSRSEKEQLQALNDRFAGYIDKV 115
Human 116 RQLEAHNRSLEGEAAALRQQQAGR--SAMGELYEREVREMRGAVLRLGAARGQLRLEQEHLLEDI 178
Human 179 AHVRQRLDDEARQ----------------------------REEAEAAARALA------------ 203
Human 204 -RFAQEAEA-ARVDLQKKAQALQEECGYLRRHHQEEVGELLG--QIQGS---GAAQAQMQAETRD 261
Human 262 ALKCDVTSALREIRAQLEGHAVQSTLQSEEWFRVRLDRLSEAAKVNTDAMRSAQ------EEITE 320
Human 321 YRRQLQARTTELEALKSTKDSLERQRSELEDRHQADIASYQEAIQQLDAELRNTKWEMAAQLREY 385
Human 386 QDLLNVKMALDIEIAAYRKLLEGEECRIGF-GPIPFSLPEGLPK----IPSVSTHIKVKSEEK-- 443
Human 444 -------------------IK----VVEKSEKETV--------------IVE------------E 459
Human 460 QTEETQVT----EEVTEEEEKEAKEEEGKEEEGG 489 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
NEFH | NP_066554.2 | Head | 1..100 | 11/48 (23%) | |
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 58..83 | 6/24 (25%) | |||
Filament | 96..412 | CDD:278467 | 113/370 (31%) | ||
Coil 1A | 101..132 | 16/30 (53%) | |||
Linker 1 | 133..145 | 3/13 (23%) | |||
Coil 1B | 146..244 | 31/141 (22%) | |||
Linker 12 | 245..266 | 5/23 (22%) | |||
Coil 2A | 267..288 | 7/20 (35%) | |||
Linker 2 | 289..292 | 1/2 (50%) | |||
Coil 2B | 293..413 | 44/125 (35%) | |||
BASP1 | 513..736 | CDD:283191 | |||
LamC | NP_001260974.1 | Filament | 45..401 | CDD:278467 | 113/370 (31%) |
ATP-synt_B | <67..>142 | CDD:304375 | 19/75 (25%) | ||
MreC | <178..>224 | CDD:302802 | 15/45 (33%) | ||
LTD | 473..574 | CDD:279300 | 12/59 (20%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |