| Sequence 1: | NP_005373.2 | Gene: | NEFM / 4741 | HGNCID: | 7734 | Length: | 916 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001024830.1 | Gene: | ifd-1 / 187585 | WormBaseID: | WBGene00002057 | Length: | 575 | Species: | Caenorhabditis elegans |
| Alignment Length: | 502 | Identity: | 123/502 - (24%) |
|---|---|---|---|
| Similarity: | 223/502 - (44%) | Gaps: | 83/502 - (16%) |
- Green bases have known domain annotations that are detailed below.
|
Human 55 SMLAPRLAYS---SAMLSSAESSL--DFSQSSSLLNGGSGPGGDYKLSRSNEKEQLQGLNDRFAG 114
Human 115 YIEKVHYLEQQNKEIEAEIQALRQKQASHAQLG---DAYDQEIRELRATLEMVNHEKAQVQLDSD 176
Human 177 H---LEEDI------------HRLKERFEEEARLR--DDTE---AAIRALRKDI-EEASLVKVEL 220
Human 221 D------KKVQSLQDEVAFLRSNHEEEVADLLAQIQASHITVE-----------------RKDYL 262
Human 263 KTDISTALKEIRSQLESHSDQNMHQAEEWFKCRYAKLTEAAEQNKEAIRSAKEEIAEYRRQLQSK 327
Human 328 SIELESVRGTKESLERQLSDIEERHNHDLSSYQDTIQQLENELRGTKWEMARHLREYQDLLNVKM 392
Human 393 ALDIEIAAYRKLLEGEETRFSTFAGSITGPLYTHRPPITISSKIQKPKVEAPKLKVQHKF----- 452
Human 453 --VEEIIEETKVEDEKSEMEEALTAITEELAVSMKEEKKEAAEEKEE 497 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| NEFM | NP_005373.2 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..51 | ||
| Head | 2..104 | 13/53 (25%) | |||
| Filament_head | 10..78 | CDD:282575 | 8/27 (30%) | ||
| Filament | 100..411 | CDD:278467 | 96/357 (27%) | ||
| Coil 1A | 105..136 | 14/30 (47%) | |||
| Linker 1 | 137..149 | 5/14 (36%) | |||
| Coil 1B | 150..248 | 34/124 (27%) | |||
| Linker 12 | 249..265 | 3/32 (9%) | |||
| Coil 2A | 266..287 | 8/20 (40%) | |||
| Linker 2 | 288..291 | 1/2 (50%) | |||
| Coil 2B | 292..412 | 26/119 (22%) | |||
| Tail | 413..916 | 16/92 (17%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 485..851 | 5/13 (38%) | |||
| 6 X 13 AA approximate tandem repeats of K-S-P-V-[PS]-K-S-P-V-E-E-[KA]-[GAK] | 614..691 | ||||
| ifd-1 | NP_001024830.1 | Filament | 53..404 | CDD:278467 | 95/355 (27%) |
| MSP1_C | <167..348 | CDD:284802 | 40/180 (22%) | ||
| LTD | 465..569 | CDD:279300 | 5/16 (31%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 1 | 1.000 | 181 | 1.000 | Domainoid score | I2296 |
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 1 | 1.000 | - | - | X62 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 4 | 3.910 | |||||