DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATOH1 and l(1)sc

DIOPT Version :10

Sequence 1:NP_005163.1 Gene:ATOH1 / 474 HGNCID:797 Length:354 Species:Homo sapiens
Sequence 2:NP_476623.1 Gene:l(1)sc / 30983 FlyBaseID:FBgn0002561 Length:257 Species:Drosophila melanogaster


Alignment Length:180 Identity:50/180 - (27%)
Similarity:73/180 - (40%) Gaps:50/180 - (27%)


- Green bases have known domain annotations that are detailed below.


Human   148 PSSKQVNGVQKQRRLAANARERRRMHGLNHAFDQLRNVIP-----SFNN-----DKKLSKYETLQ 202
            |..:|:..|.::     |||||.|:..:|:.|..||..:|     |.:|     .|||||.:||:
  Fly    77 PYGEQLPSVARR-----NARERNRVKQVNNGFVNLRQHLPQTVVNSLSNGGRGSSKKLSKVDTLR 136

Human   203 MAQIYINALSELLQTPSGGEQPPPPPASCKSDHHHLRTA--ASYEGGAGN--------------A 251
            :|..||..|.::|.           ..:..|..|...:|  :|.:|.:.|              .
  Fly   137 IAVEYIRGLQDMLD-----------DGTASSTRHIYNSADESSNDGSSYNDYNDSLDSSQQFLTG 190

Human   252 TAAGAQQASGGSQRPTPPGSCRTRFSAPASAGGY---SVQLDALHFSTFE 298
            ....||..|..|..|||..|     .:..|.|||   .:|...|.|.:|:
  Fly   191 ATQSAQSHSYHSASPTPSYS-----GSEISGGGYIKQELQEQDLKFDSFD 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATOH1NP_005163.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..55
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 91..122
bHLH_TS_ATOH1 155..218 CDD:381556 26/72 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 216..277 14/76 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 312..354
l(1)scNP_476623.1 bHLH_TS_dAS-C_like 94..149 CDD:381587 19/54 (35%)
Blue background indicates that the domain is not in the aligned region.

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