DRSC/TRiP Functional Genomics Resources

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Protein Alignment sra and snx7

DIOPT Version :10

Sequence 1:NP_524378.1 Gene:sra / 47384 FlyBaseID:FBgn0086370 Length:292 Species:Drosophila melanogaster
Sequence 2:NP_001017205.1 Gene:snx7 / 549959 XenbaseID:XB-GENE-1014933 Length:441 Species:Xenopus tropicalis


Alignment Length:166 Identity:38/166 - (22%)
Similarity:59/166 - (35%) Gaps:56/166 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SDAAKSNNNASADAPDPTTPDATG-------EADAANAATPTTPRGNHNNNNSANGRSKNKLKST 59
            |....::.::|..:|.|.:|||..       |..:.:||.             .:|.|.:.|...
 Frog    13 SPGCLTSGHSSLLSPMPLSPDALQFDEDDDLEVFSKDAAL-------------TDGNSFSPLMLA 64

  Fly    60 QNSSGGGSIDKL----SPD-QDIFINAADGLPNQHPSLPKEGDVDSDTEPEVDADSFDDLPTSII 119
            ..||   .|::.    .|| :||||.                 ||   |||...::.:...|..|
 Frog    65 SPSS---MINQYKFEDEPDVKDIFIT-----------------VD---EPESHVNAIETFITYRI 106

  Fly   120 VTNIHSEVFANPELKHAMEELFRTFSESATFQWLRS 155
            .|......|.:.|.     |:.|.:.:   |.||:|
 Frog   107 ATKTSRSQFDSSEF-----EVRRRYQD---FLWLKS 134

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sraNP_524378.1 RRM_SF 127..>265 CDD:473069 8/29 (28%)
snx7NP_001017205.1 PX_SNX7 84..199 CDD:132817 19/79 (24%)
BAR_SNX7 183..426 CDD:153350
Blue background indicates that the domain is not in the aligned region.

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