DRSC/TRiP Functional Genomics Resources

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Protein Alignment sra and rcan2

DIOPT Version :10

Sequence 1:NP_524378.1 Gene:sra / 47384 FlyBaseID:FBgn0086370 Length:292 Species:Drosophila melanogaster
Sequence 2:NP_001011215.1 Gene:rcan2 / 496648 XenbaseID:XB-GENE-945556 Length:243 Species:Xenopus tropicalis


Alignment Length:237 Identity:90/237 - (37%)
Similarity:125/237 - (52%) Gaps:33/237 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 GGGSIDKLSP-----DQDIFINAADGLPNQHPSLPKEGDVDSDTEPEVDADSFDDLPTSIIVTNI 123
            |||.:..|.|     |...|::              |.|....|:       |:|||.|:...|:
 Frog    21 GGGELLLLYPMHRNRDLSRFLS--------------EEDFQGITD-------FNDLPNSLFACNV 64

  Fly   124 HSEVFANPELKHAMEELFRTFSESATFQWLRSFRRLRVNYDNAIAAANARIKLHQYEFNKKTVIT 188
            |..||.:.:.|...|.|||::.:..|.|..:||||:|:|:.|..|||.|||:||:.:|..|. :.
 Frog    65 HQSVFEDEDSKEKFEGLFRSYDDCVTLQLFKSFRRVRINFSNPKAAARARIELHETQFRGKK-LK 128

  Fly   189 CYFAQ---PVTPVSNKNLQPPAPVKQFLISPPASPPAGWEPREEGEPLVNHDLLAALASLTPGES 250
            .||||   ..|.....:|.||.|.||||||||.|||.||:|.::..|::|:|||.|:|.|.|||.
 Frog   129 LYFAQVQSSETDGDKLHLAPPQPAKQFLISPPVSPPVGWQPIDDATPVINYDLLYAVAKLGPGEK 193

  Fly   251 HELHPQSEDQPAIIVHTA---MLAETGPGLQVKAPIVQTKCP 289
            :|||..:|..|:::||..   |..|.......|..|:.|:.|
 Frog   194 YELHAGTESTPSVVVHVCDSDMEEEEDTKNSPKPKIIPTRRP 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sraNP_524378.1 RRM_SF 127..>265 CDD:473069 65/140 (46%)
rcan2NP_001011215.1 Calcipressin 68..236 CDD:282674 73/169 (43%)

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