DRSC/TRiP Functional Genomics Resources

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Protein Alignment sra and rcan2

DIOPT Version :10

Sequence 1:NP_524378.1 Gene:sra / 47384 FlyBaseID:FBgn0086370 Length:292 Species:Drosophila melanogaster
Sequence 2:NP_001307157.1 Gene:rcan2 / 407988 ZFINID:ZDB-GENE-040516-17 Length:238 Species:Danio rerio


Alignment Length:186 Identity:86/186 - (46%)
Similarity:113/186 - (60%) Gaps:7/186 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 FDDLPTSIIVTNIHSEVFANPELKHAMEELFRTFSESATFQWLRSFRRLRVNYDNAIAAANARIK 175
            |:|||||:...|:...||.:.|.|...|.||..:.|..|||..:||||:|:|:.|..|||:|||:
Zfish    49 FNDLPTSLFACNVDQSVFEDHEGKEMFEALFLAYDEGVTFQQFKSFRRVRINFSNPKAAASARIE 113

  Fly   176 LHQYEFNKKTVITCYFAQPVTPVS---NKNLQPPAPVKQFLISPPASPPAGWEPREEGEPLVNHD 237
            ||:..|..|. :..||||...|||   |.:|.||.|.||||||||.|||.||:..:|..|::|:|
Zfish   114 LHETPFRGKK-LKLYFAQVQNPVSEGDNLHLAPPQPSKQFLISPPGSPPVGWQQIDEATPVINYD 177

  Fly   238 LLAALASLTPGESHELHPQSEDQPAIIVHTA---MLAETGPGLQVKAPIVQTKCPE 290
            ||.|:|.|.|||..|||..:|..|:::||..   ...|..|....|..|:||:.|:
Zfish   178 LLYAVAKLGPGEKFELHAGTESTPSVVVHVCDSDTDEEEEPKNNPKPKIIQTRRPD 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sraNP_524378.1 RRM_SF 127..>265 CDD:473069 70/140 (50%)
rcan2NP_001307157.1 Calcipressin 65..232 CDD:282674 78/167 (47%)

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