DRSC/TRiP Functional Genomics Resources

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Protein Alignment sra and rcan1b

DIOPT Version :10

Sequence 1:NP_524378.1 Gene:sra / 47384 FlyBaseID:FBgn0086370 Length:292 Species:Drosophila melanogaster
Sequence 2:XP_073805411.1 Gene:rcan1b / 336348 ZFINID:ZDB-GENE-030131-8292 Length:208 Species:Danio rerio


Alignment Length:185 Identity:80/185 - (43%)
Similarity:116/185 - (62%) Gaps:13/185 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 PTSIIVTNIHSEVFANPELKHAMEELFRTFSESATFQWLRSFRRLRVNYDNAIAAANARIKLHQY 179
            |.::|...:..|||..|:||...|.|||.|....:||:.:||||:|:|:.:|:|||.||:|||:.
Zfish    21 PNALIACKVAEEVFNEPQLKEQFEALFRAFDPGTSFQFFKSFRRVRINFTDALAAAEARVKLHKS 85

  Fly   180 EFNKKTVITCYFAQPVTPVSNKNLQPPAPVKQFLISPPASPPAGWEPREEGEPLVNHDLLAALAS 244
            :||.|. :..||||.| .:.:..|:||.|.||||||||||||.||...::..|::|:|||.|::.
Zfish    86 DFNGKE-MRLYFAQSV-HIGSPRLEPPKPEKQFLISPPASPPVGWAQSQDAMPVINYDLLCAVSK 148

  Fly   245 LTPGESHELHPQSEDQPAIIVHTA---------MLAETGPGLQVKAPIVQTKCPE 290
            |.|||.:|||..:.:.|::|||..         ..||.|.  :.:..|:||:.|:
Zfish   149 LGPGEQYELHSGTTNTPSVIVHVCEDDSSEGEDENAEGGK--RARPKIIQTRRPD 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sraNP_524378.1 RRM_SF 127..>265 CDD:473069 67/137 (49%)
rcan1bXP_073805411.1 None

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