DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sra and RCAN2

DIOPT Version :10

Sequence 1:NP_524378.1 Gene:sra / 47384 FlyBaseID:FBgn0086370 Length:292 Species:Drosophila melanogaster
Sequence 2:NP_001238902.1 Gene:RCAN2 / 10231 HGNCID:3041 Length:243 Species:Homo sapiens


Alignment Length:224 Identity:92/224 - (41%)
Similarity:128/224 - (57%) Gaps:21/224 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 PNQHPSLPKEGD------VDSD-------TEPEVDA-DSFDDLPTSIIVTNIHSEVFANPELKHA 136
            |.|...:|::|.      :|.|       .|....| ..|:|||.|:...|:|..||...|.|..
Human    13 PGQQGHVPEDGGLFLLCCIDRDWAVTRCFAEEAFQAITDFNDLPNSLFACNVHQSVFEGEESKEK 77

  Fly   137 MEELFRTFSESATFQWLRSFRRLRVNYDNAIAAANARIKLHQYEFNKKTVITCYFAQPVTPVSN- 200
            .|.||||:.:..|||..:||||:|:|:.|..:||.|||:||:.:|..|. :..||||..||.:: 
Human    78 FEGLFRTYDDCVTFQLFKSFRRVRINFSNPKSAARARIELHETQFRGKK-LKLYFAQVQTPETDG 141

  Fly   201 --KNLQPPAPVKQFLISPPASPPAGWEPREEGEPLVNHDLLAALASLTPGESHELHPQSEDQPAI 263
              .:|.||.|.||||||||:|||.||:|..:..|::|:|||.|:|.|.|||.:|||..:|..|::
Human   142 DKLHLAPPQPAKQFLISPPSSPPVGWQPINDATPVLNYDLLYAVAKLGPGEKYELHAGTESTPSV 206

  Fly   264 IVHTA---MLAETGPGLQVKAPIVQTKCP 289
            :||..   :..|..|....|..|:||:.|
Human   207 VVHVCDSDIEEEEDPKTSPKPKIIQTRRP 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sraNP_524378.1 RRM_SF 127..>265 CDD:473069 68/140 (49%)
RCAN2NP_001238902.1 Calcipressin 68..236 CDD:282674 77/169 (46%)

Return to query results.
Submit another query.