Sequence 1: | NP_477026.1 | Gene: | repo / 47285 | FlyBaseID: | FBgn0011701 | Length: | 612 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_004780.3 | Gene: | LHX2 / 9355 | HGNCID: | 6594 | Length: | 406 | Species: | Homo sapiens |
Alignment Length: | 245 | Identity: | 67/245 - (27%) |
---|---|---|---|
Similarity: | 98/245 - (40%) | Gaps: | 53/245 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 188 LYGGSPHHLDHLDHGSDGLLQDSSPVMINGGSAGGKLKKPDEMCSQLEAGGAGVTPPSSSSTVVN 252
Fly 253 GTTNGT---GNANSSSSAGVGIQGAAGTAGGVAAPAAKKDGSS-SKKKGDPNGIKKKKTRTTFTA 313
Fly 314 YQLEELERAFERAPYPDVFAREELAIKLNLSESRVQVWFQNRRAKWRKH-EPPRKTGY------- 370
Fly 371 IKTSTP--PTATLNPGTLAPPFT-------SYPQTTTVTP-----PGSMD 406 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
repo | NP_477026.1 | Homeobox | 313..360 | CDD:278475 | 18/46 (39%) |
LHX2 | NP_004780.3 | LIM1_Lhx2 | 43..106 | CDD:188853 | |
LIM2_Lhx2_Lhx9 | 111..169 | CDD:188763 | |||
COG5576 | <247..378 | CDD:227863 | 37/130 (28%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 250..270 | 4/19 (21%) | |||
Homeobox | 270..323 | CDD:395001 | 21/52 (40%) | ||
Nuclear localization signal. /evidence=ECO:0000255 | 307..323 | 9/15 (60%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 328..374 | 10/45 (22%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 387..406 | 1/4 (25%) | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |