DRSC/TRiP Functional Genomics Resources

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Protein Alignment repo and RAX2

DIOPT Version :9

Sequence 1:NP_477026.1 Gene:repo / 47285 FlyBaseID:FBgn0011701 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_001306003.2 Gene:RAX2 / 84839 HGNCID:18286 Length:184 Species:Homo sapiens


Alignment Length:167 Identity:66/167 - (39%)
Similarity:83/167 - (49%) Gaps:33/167 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   272 QGAAGTAGGVAAPAAKKDGSSSKKKGDPNGIKKKKTRTTFTAYQLEELERAFERAPYPDVFAREE 336
            :|.| |.||...|     |..:.||      |.::.|||||.|||.:||||||.:.||||::|||
Human     7 EGPA-TEGGGLGP-----GEEAPKK------KHRRNRTTFTTYQLHQLERAFEASHYPDVYSREE 59

  Fly   337 LAIKLNLSESRVQVWFQNRRAKWRKHEPPRK-TGYIKTSTPPTATLNPGTLAPPFTSYPQTTTVT 400
            ||.|::|.|.||||||||||||||:.|.... :|.:.....|.|...| ...||..|.|....:.
Human    60 LAAKVHLPEVRVQVWFQNRRAKWRRQERLESGSGAVAAPRLPEAPALP-FARPPAMSLPLEPWLG 123

  Fly   401 P---------------PGSMDSWTSYQTPYELTPQFS 422
            |               ||...|:    .|:...|.|:
Human   124 PGPPAVPGLPRLLGPGPGLQASF----GPHAFAPTFA 156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
repoNP_477026.1 Homeobox 313..360 CDD:278475 33/46 (72%)
RAX2NP_001306003.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..33 11/37 (30%)
Homeobox 31..84 CDD:395001 39/52 (75%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000011
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.910

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