DRSC/TRiP Functional Genomics Resources

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Protein Alignment repo and ANL2

DIOPT Version :10

Sequence 1:NP_477026.1 Gene:repo / 47285 FlyBaseID:FBgn0011701 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_567183.2 Gene:ANL2 / 828022 AraportID:AT4G00730 Length:802 Species:Arabidopsis thaliana


Alignment Length:201 Identity:51/201 - (25%)
Similarity:81/201 - (40%) Gaps:49/201 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   205 GLLQDSSPVMINGGSAGGKLKK--------------PDEMCSQLEAGGAGVTPPSSSSTVVN--- 252
            |.|.|::|   .|||.|.:|..              |....:|..|..:..:||.:.|...:   
plant     4 GSLFDNTP---GGGSTGARLLSGLSYGNHTAATNVLPGGAMAQAAAAASLFSPPLTKSVYASSGL 65

  Fly   253 ---------GTTNGTGNANSSSSAGVGIQGAAGTAGGVAAPAAKKDGSSSKKKGD-PNGIK---- 303
                     ||..|..:..::::.|    |...|..|.....::::...|:...| ..||.    
plant    66 SLALEQPERGTNRGEASMRNNNNVG----GGGDTFDGSVNRRSREEEHESRSGSDNVEGISGEDQ 126

  Fly   304 -------KKKTRTTFTAYQLEELERAFERAPYPDVFAREELAIKLNLSESRVQVWFQNRRAKWR- 360
                   :||.....|..|::|||..|:..|:||...|.||:.:|.|...:|:.||||||.:.: 
plant   127 DAADKPPRKKRYHRHTPQQIQELESMFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 191

  Fly   361 ---KHE 363
               :||
plant   192 QLERHE 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
repoNP_477026.1 Homeodomain 313..361 CDD:459649 20/51 (39%)
ANL2NP_567183.2 Homeodomain 135..190 CDD:459649 23/54 (43%)
START_ArGLABRA2_like 319..542 CDD:176884
Blue background indicates that the domain is not in the aligned region.

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