powered by:
Protein Alignment repo and Rhox13
DIOPT Version :9
Sequence 1: | NP_477026.1 |
Gene: | repo / 47285 |
FlyBaseID: | FBgn0011701 |
Length: | 612 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001171931.1 |
Gene: | Rhox13 / 73614 |
MGIID: | 1920864 |
Length: | 232 |
Species: | Mus musculus |
Alignment Length: | 179 |
Identity: | 51/179 - (28%) |
Similarity: | 76/179 - (42%) |
Gaps: | 32/179 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 216 NGGSAGGKLKKPDEMCSQLEAGGAGVTPPSSSS--TVVNGTTNGTGNANSSSSAGVGIQGAAGTA 278
:||:.|....|..|..|:.|:.....:..|.|| :..:.:|:....::...:|...:...|..|
Mouse 54 SGGAIGCATVKESESDSESESDSESESDSSDSSDESDDDSSTSDEDTSDPEEAAAPSVAAVAAAA 118
Fly 279 GGVAAPAA-------------KKDGSSSKKKGDPNGIKKKKTRTTFTAYQLEELERAFERAPYPD 330
.....||| .:.....:::|.| ..|..:|:||:|..||...|||
Mouse 119 APPTVPAAAAIQIPGPYRYRPPRRHVRRRRRGPP---------FHFAQWQVEEMESLFEETQYPD 174
Fly 331 VFAREELAIKLNLSESRVQVWFQNRRAKWRKHE--------PPRKTGYI 371
:..|.|||..||:.|.:|:|||.|||||.||.| ||....:|
Mouse 175 LLTRGELARTLNVPEVKVKVWFTNRRAKQRKIERREMLRNIPPGAEDFI 223
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000011 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.910 |
|
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