Protein Alignment repo and shox

DIOPT Version :10

• Sequence 1: NP_477026.1
• Gene: repo / 47285
• FlyBaseID: FBgn0011701
• Length: 612
• Species: Drosophila melanogaster
• Sequence 2: XP_005167911.1
• Gene: shox / 664748
• ZFINID: ZDB-GENE-051030-21
• Length: 304
• Species: Danio rerio
• Alignment Length: 156
• Identity: 60/156 - (38%)
• Similarity: 81/156 - (51%)
• Gaps: 15/156 - (9%)

  Fly   287 KKDGSSSKKKGDPNGIKKKKTRTTFTAYQLEELERAFERAPYPDVFAREELAIKLNLSESRVQVW 351
            ||:...|:.:...:.:|::::||.||..||.||||.|:...|||.|.||||:.:|.|||:|||||
Zfish    92 KKEDVKSEDEDAQSKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVW 156

  Fly   352 FQNRRAKWRKHEPPRKTGYI-KTSTPPTAT-----LNPGTLAPPFTSYPQTTTVTPPGS-----M 405
            |||||||.||.|.....|.| .|::...|.     :|.|.|..||........:...|:     :
Zfish   157 FQNRRAKCRKQENQMHKGVILGTASHLDACRVAPYVNMGALRMPFQQVQAQLQLEGVGTHSHPHL 221

  Fly   406 DSWTSYQTPYEL--TPQFSLLSPAAS 429
            ....:...||.:  .|.|.|  |.||
Zfish   222 HPHLAAHAPYLMFPPPPFGL--PIAS 245

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
repo	NP_477026.1	Homeodomain	313..361	CDD:459649	31/47 (66%)
shox	XP_005167911.1	SCP-1	<1..>145	CDD:114219	23/52 (44%)
		Homeodomain	110..166	CDD:459649	35/55 (64%)