Protein Alignment repo and SHOX2

DIOPT Version :9

• Sequence 1: NP_477026.1
• Gene: repo / 47285
• FlyBaseID: FBgn0011701
• Length: 612
• Species: Drosophila melanogaster
• Sequence 2: NP_003021.3
• Gene: SHOX2 / 6474
• HGNCID: 10854
• Length: 355
• Species: Homo sapiens
• Alignment Length: 342
• Identity: 90/342 - (26%)
• Similarity: 128/342 - (37%)
• Gaps: 96/342 - (28%)

  Fly   222 GKLKKPDEMCSQLEAGGAGVTPPSSSSTVVNGTTNGTGNANSSSSAGVGIQGAAGTAGGVAAPAA 286
            |.|:...|.....|||....:.|:..: ...|...|.|........|||..||.|.|||..:|..
Human    32 GPLRGAKEPTGCTEAGRDDRSSPAVRA-AGGGGGGGGGGGGGGGGGGVGGGGAGGGAGGGRSPVR 95

  Fly   287 KKDGSSSKKKGDPNG-------------------------------------------------- 301
            :.|..::::..:|..
Human    96 ELDMGAAERSREPGSPRLTEGRRKPTKAEVQATLLLPGEAFRFLVSPELKDRKEDAKGMEDEGQT 160

  Fly   302 -IKKKKTRTTFTAYQLEELERAFERAPYPDVFAREELAIKLNLSESRVQVWFQNRRAKWRKHEPP 365
             ||::::||.||..||.||||.|:...|||.|.||||:.:|.|||:||||||||||||.||.|..
Human   161 KIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQ 225

  Fly   366 RKTGYIKTSTPP------TATLNPGTLAPPFTSYPQTTTVTPPG-------SMDSWTSYQTPYEL 417
            ...|.:..:...      ...:|.|.|..|| .......|||..       .:||..:: ..:.|
Human   226 LHKGVLIGAASQFEACRVAPYVNVGALRMPF-QQDSHCNVTPLSFQVQAQLQLDSAVAH-AHHHL 288

  Fly   418 TPQFSLLSPAASPYGTYSGQYGAYVHESQLFPMRHYEYGSPTRMEMGATTGSVAGNGDESVANGG 482
            .|..:    |.:||              .:||..  .:|.|.     ||..:.:.:....||...
Human   289 HPHLA----AHAPY--------------MMFPAP--PFGLPL-----ATLAADSASAASVVAAAA 328

  Fly   483 SYQTAELQTAQQQQLAD 499
            :.:|    |::...:||
Human   329 AAKT----TSKNSSIAD 341

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
repo	NP_477026.1	Homeobox	313..360	CDD:278475	31/46 (67%)
SHOX2	NP_003021.3	Homeobox	167..220	CDD:306543	35/52 (67%)
		OAR	335..351	CDD:309087	2/7 (29%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000011
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R6207
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
User_Submission	0	0.000	Not matched by this tool.
	3	2.940