DRSC/TRiP Functional Genomics Resources

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Protein Alignment repo and LOC5666764

DIOPT Version :10

Sequence 1:NP_477026.1 Gene:repo / 47285 FlyBaseID:FBgn0011701 Length:612 Species:Drosophila melanogaster
Sequence 2:XP_061505688.1 Gene:LOC5666764 / 5666764 VectorBaseID:AGAMI1_014787 Length:591 Species:Anopheles gambiae


Alignment Length:414 Identity:111/414 - (26%)
Similarity:153/414 - (36%) Gaps:149/414 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   303 KKKKTRTTFTAYQLEELERAFERAPYPDVFAREELAIKLNLSESRVQVWFQNRRAKWRKHE---- 363
            |:::.||||.:.||:||||||:|..|||||.|||||::::|:|:|||||||||||||||.|    
Mosquito     4 KQRRYRTTFNSLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWRKSEKTTG 68

  Fly   364 ------PPRKTGYIKTSTPPTATLNPGTLAPPFTSYPQTTTVTPPGSMDSWTSYQTPYELTPQFS 422
                  .|.:.|....||...|.               ||.....|:.|:..       |..:..
Mosquito    69 GGPGGGDPDQDGQDVLSTSTGAA---------------TTCPRADGTGDTGL-------LGAEVG 111

  Fly   423 LLSPAASPYGTYSGQYGAYVHESQLFPMRHYEYGSPTRMEM--GATTGSVAGNGDESVANGGSYQ 485
            ||..||...|:           |::......:.|.....|:  |...|..:.:..::||:.|...
Mosquito   112 LLVDAADATGS-----------SRMLNDDEDDDGLGLSDEVLHGMGGGLKSQHHSQAVASLGGLG 165

  Fly   486 TAELQTAQQQQLADGTLVTVHAHQQQQQQQQQLN----GKYLSAEEAKYVHLQCHQSGGGLELSP 546
            .: |..|...:.|...|   |.|.|||||||..:    |...|..:...|.|....|..||... 
Mosquito   166 KS-LNDAMSGEQAGHHL---HHHLQQQQQQQHQHHVGPGARTSLLDTVDVVLPGSSSSSGLTFD- 225

  Fly   547 GASCH----------------------LVEAQ--------------------------------- 556
            |.|.|                      :|:|:                                 
Mosquito   226 GGSLHGMTLGLADDPTGPGVVSSSGYSVVDAELPRLTIGSLSSPGRLSPNLFLNLNFDHLNSLDG 290

  Fly   557 -----------------------------GQHYVTTATGGAASAGG----TSSDDNDSGGMQTVI 588
                                         |..|.||:|..::||.|    .|:...||||..|:.
Mosquito   291 SRSSSLTFEWNSFTGASTTTSSATKLTPTGTPYTTTSTSVSSSADGCLGTVSAASQDSGGCCTLH 355

  Fly   589 KSE-------EVSQQQQQQQGQSY 605
            .::       ..:||||.||.|.:
Mosquito   356 SNDGPAQSLHHHAQQQQLQQHQHH 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
repoNP_477026.1 Homeodomain 313..361 CDD:459649 34/47 (72%)
LOC5666764XP_061505688.1 None

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