powered by:
Protein Alignment repo and pdlim3b
DIOPT Version :9
Sequence 1: | NP_477026.1 |
Gene: | repo / 47285 |
FlyBaseID: | FBgn0011701 |
Length: | 612 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_005157291.1 |
Gene: | pdlim3b / 561865 |
ZFINID: | ZDB-GENE-060130-104 |
Length: | 332 |
Species: | Danio rerio |
Alignment Length: | 119 |
Identity: | 25/119 - (21%) |
Similarity: | 46/119 - (38%) |
Gaps: | 17/119 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 290 GSSSKKKGDPNGIKKKKTRTTFTAYQLEELERAFERAPYPDVFAREELAIK--LNLSESRVQVWF 352
|:.::..|.|:.....:..:....|..:.:....::|....|..:...:.| .::.:|.|....
Zfish 142 GNVAQMAGTPSTAHSVQYNSPVALYSADNVSNTLQQAQMSTVVRQASPSSKPLTSIEDSHVYRML 206
Fly 353 QNRRAKWRKHEPPRKTGYIKT--------STPPTATLNPGTLAPPFTSYPQTTT 398
|: |..:.|| ||::|..|. .|.|..| .::..|.|. ||..|
Zfish 207 QD--ANEQPHE-PRQSGSFKALQDYVESDGTRPMVT---RSVKAPVTK-PQAAT 253
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R6207 |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
1 | 1.030 |
|
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