DRSC/TRiP Functional Genomics Resources

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Protein Alignment repo and dmbx1b

DIOPT Version :10

Sequence 1:NP_477026.1 Gene:repo / 47285 FlyBaseID:FBgn0011701 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_001017625.1 Gene:dmbx1b / 550288 ZFINID:ZDB-GENE-050417-97 Length:369 Species:Danio rerio


Alignment Length:322 Identity:80/322 - (24%)
Similarity:120/322 - (37%) Gaps:96/322 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   303 KKKKTRTTFTAYQLEELERAFERAPYPDVFAREELAIKLNLSESRVQVWFQNRRAKWRKHE---- 363
            |::::||.|||.|||.||:.|::..||||..||.||:..||.|:||||||:|||||:||.:    
Zfish    65 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKKQRSLQ 129

  Fly   364 -----------------------PPRKTGYIKTSTPPTATLNPGTLAPPFTSYPQTTTVTPP--- 402
                                   ||     ::...||:.....|..:.|.....:...||.|   
Zfish   130 KEQLQRLKEAGTEGAQDEGKEEAPP-----VEAQAPPSPLDGRGLTSAPSCELNEEVNVTSPEQS 189

  Fly   403 ----GSMDSWTSYQTPYEL----------------TPQFSLLSP--------------------- 426
                |:.|:......|..:                :|.:..|||                     
Zfish   190 GAESGAEDTTDREDEPLSIKDEIKEAGPPLMTDDSSPSYKPLSPKSDDPLVSPALPSSSGAVAQS 254

  Fly   427 ---AASPYGTYSGQYGAYVHESQLFPMRHY---EYGSPTRME-MGATTGSVAGNGDESVANGGSY 484
               |:||...:..|.....|.:....:.||   :..:|:.:. :|......:..|  |:.....|
Zfish   255 NSYASSPLSLFRLQEQFRQHMAATNNLMHYPAFDVTAPSSLPYLGVNVNMASPLG--SLPCQPYY 317

  Fly   485 QTAELQTAQQQQLADGTLVTVHAHQQQQQQQQQLNGKYLSAEEAKYVHLQCHQSGGGLELSP 546
            ||    ..|.||:....|:      |.......||.|..|.|..: :..:.|.:..||:..|
Zfish   318 QT----LTQAQQMWSSPLL------QGSGGLPALNSKTTSIENLR-LRAKQHAASLGLDTLP 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
repoNP_477026.1 Homeodomain 313..361 CDD:459649 29/47 (62%)
dmbx1bNP_001017625.1 Homeodomain 67..123 CDD:459649 33/55 (60%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 124..253 16/133 (12%)
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 346..359 2/13 (15%)

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