Protein Alignment repo and otx2

DIOPT Version :10

• Sequence 1: NP_477026.1
• Gene: repo / 47285
• FlyBaseID: FBgn0011701
• Length: 612
• Species: Drosophila melanogaster
• Sequence 2: XP_012823826.1
• Gene: otx2 / 548931
• XenbaseID: XB-GENE-485220
• Length: 306
• Species: Xenopus tropicalis
• Alignment Length: 208
• Identity: 69/208 - (33%)
• Similarity: 96/208 - (46%)
• Gaps: 42/208 - (20%)

  Fly   303 KKKKTRTTFTAYQLEELERAFERAPYPDVFAREELAIKLNLSESRVQVWFQNRRAKWRKHEPPRK 367
            |:::.|||||..||:.||..|.:..|||:|.|||:|:|:||.||||||||:|||||.|:.:..::
 Frog    54 KQRRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQQQQ 118

  Fly   368 TGYIKTSTPPTATLNP-----------GTLAPP-FTSYPQTTTVTPPGSMDSWTSYQTPYELTPQ 420
            .|......|.....:|           |..:|| .||.|..::.|.|.|:  |    :|..::|.
 Frog   119 NGGQNKVRPSKKKPSPAREVSSESGTSGQFSPPCSTSVPVISSSTAPVSI--W----SPASISPL 177

  Fly   421 FSLLSPAAS--------PYGTYSGQYGAYVHESQLF----------PMRHYEYGSPTRMEMGATT 467
            ...||.::|        .|...||....|...:..|          ||.|...|:      |||.
 Frog   178 SDPLSTSSSCMQRSYPMTYTQASGYSQGYAGSTSYFGGMDCGSYLTPMHHQLSGA------GATL 236

  Fly   468 GSVAGNGDESVAN 480
            ..:..|...|..|
 Frog   237 SPMGTNAVTSHLN 249

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
repo	NP_477026.1	Homeodomain	313..361	CDD:459649	29/47 (62%)
otx2	XP_012823826.1	Homeodomain	56..111	CDD:459649	34/54 (63%)
		TF_Otx	170..251	CDD:427350	20/86 (23%)