Protein Alignment repo and phox2bb

DIOPT Version :10

• Sequence 1: NP_477026.1
• Gene: repo / 47285
• FlyBaseID: FBgn0011701
• Length: 612
• Species: Drosophila melanogaster
• Sequence 2: NP_001014818.1
• Gene: phox2bb / 544654
• ZFINID: ZDB-GENE-050407-3
• Length: 284
• Species: Danio rerio
• Alignment Length: 242
• Identity: 76/242 - (31%)
• Similarity: 97/242 - (40%)
• Gaps: 65/242 - (26%)

  Fly   263 SSSSAGVGIQ------------GAAGTAGGVAAPAAKKDGSSS-------KKKGDPNGI----KK 304
            ||.|...|.|            |......|..:....:|..||       |...|..|:    |:
Zfish    34 SSCSQASGFQYNPIRTTFGATSGCPSLTPGSCSLGTLRDHQSSPYAAVPYKLFTDHGGLNEKRKQ 98

  Fly   305 KKTRTTFTAYQLEELERAFERAPYPDVFAREELAIKLNLSESRVQVWFQNRRAKWRKHE------ 363
            ::.|||||:.||:||||.|....|||::.|||||:|::|:|:||||||||||||:||.|
Zfish    99 RRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFRKQERAAAAA 163

  Fly   364 -PPRKTGYIKTS------------TPPTATLNPGTLAPPFTSY--PQTT---------------- 397
             ...|.|..|.|            |.|.:|..||....|.::.  |..|
Zfish   164 AAAAKNGTGKKSDSREEDSKEAKATDPDSTGGPGPNPNPTSNCGGPSPTGGQVSATGNGPVEQVK 228

  Fly   398 ----TVTPPGSMDSWTSYQTPYELTPQFSLLSPAASPYGTYSGQYGA 440
                .:.|......|.|........|. ||..|.||...:...|.||
Zfish   229 TSVAGMGPTAPTQGWASAPGTITSIPD-SLGGPFASVLSSLQRQNGA 274

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
repo	NP_477026.1	Homeodomain	313..361	CDD:459649	30/47 (64%)
phox2bb	NP_001014818.1	Homeodomain	99..155	CDD:459649	35/55 (64%)