DRSC/TRiP Functional Genomics Resources

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Protein Alignment repo and PRRX2

DIOPT Version :10

Sequence 1:NP_477026.1 Gene:repo / 47285 FlyBaseID:FBgn0011701 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_057391.1 Gene:PRRX2 / 51450 HGNCID:21338 Length:253 Species:Homo sapiens


Alignment Length:246 Identity:77/246 - (31%)
Similarity:112/246 - (45%) Gaps:58/246 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   215 INGGSAGGKLKKPDEMCSQLEAGGAGVTPPSSS----------------------STVVNGTTNG 257
            ::..:|...|.||        |.|.|..||..:                      .....|....
Human     1 MDSAAAAFALDKP--------ALGPGPPPPPPALGPGDCAQARKNFSVSHLLDLEEVAAAGRLAA 57

  Fly   258 TGNANSSSSAGVGIQGAAGTAGGVAAP-----AAKKDGSSSKKKGDPNGIKKKKTRTTFTAYQLE 317
            ...|.:.:..|...:.:.|::|..|||     .:...||::|:|.     |:::.||||.:.||:
Human    58 RPGARAEAREGAAREPSGGSSGSEAAPQDGECPSPGRGSAAKRKK-----KQRRNRTTFNSSQLQ 117

  Fly   318 ELERAFERAPYPDVFAREELAIKLNLSESRVQVWFQNRRAKWRKHE----PPRKTGYIKTSTPPT 378
            .|||.|||..|||.|.|||||.::||||:||||||||||||:|::|    ..|....:|:.:...
Human   118 ALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAMLASRSASLLKSYSQEA 182

  Fly   379 ATLNPGTLAPPFTSYPQTTTVTPPGSMDSWTSYQTPYELTPQFSLLSPAAS 429
            |...|..        |:.|.::|  ...|||: .:||...|.:   ||.:|
Human   183 AIEQPVA--------PRPTALSP--DYLSWTA-SSPYSTVPPY---SPGSS 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
repoNP_477026.1 Homeodomain 313..361 CDD:459649 33/47 (70%)
PRRX2NP_057391.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..33 9/39 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 55..113 16/62 (26%)
Homeodomain 109..161 CDD:459649 36/51 (71%)
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 230..243
Blue background indicates that the domain is not in the aligned region.

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