Protein Alignment repo and Rhox8

DIOPT Version :10

• Sequence 1: NP_477026.1
• Gene: repo / 47285
• FlyBaseID: FBgn0011701
• Length: 612
• Species: Drosophila melanogaster
• Sequence 2: NP_001020947.1
• Gene: Rhox8 / 503423
• RGDID: 1561047
• Length: 178
• Species: Rattus norvegicus
• Alignment Length: 204
• Identity: 59/204 - (28%)
• Similarity: 88/204 - (43%)
• Gaps: 54/204 - (26%)

  Fly   181 EPQ---QLQHLYGGSPHHLDHLDHGSDG----LLQD----SSPVMING----------GSAGGKL 224
            |||   |..||..      |.:...::.    :|||    ....::.|          |....:.
  Rat     2 EPQEVTQYSHLRD------DQIKESNEAAAWIVLQDIKEREEKEVVQGYPMLDTTATEGEGANEE 60

  Fly   225 KKPDEMCSQLEAGGAGVTPP-SSSSTVVNGTTNGTGNANSSSSAGVGIQGAAG-TAGGVAAPAAK 287
            :..||           :||. ||:|..|:..:...|.:::....|...:...| |.|..|:|..
  Rat    61 ESRDE-----------ITPAGSSASASVDDRSQDGGTSSNDQDKGQQKEPIPGSTKGHQASPRL- 113

  Fly   288 KDGSSSKKKGDPNGIKKKKTRTTFTAYQLEELERAFERAPYPDVFAREELAIKLNLSESRVQVWF 352
                       |..:.:.:.|  ||.:||:||||.|||..||...||.|||..:.::||||:.||
  Rat   114 -----------PGQLSRNRHR--FTEFQLQELERIFERNHYPSAAARRELARWIGVTESRVENWF 165

  Fly   353 QNRRAKWRK 361
            ::||||:||
  Rat   166 KSRRAKYRK 174

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
repo	NP_477026.1	Homeodomain	313..361	CDD:459649	26/47 (55%)
Rhox8	NP_001020947.1	Homeodomain	119..174	CDD:459649	29/56 (52%)