Protein Alignment repo and E5

DIOPT Version :10

• Sequence 1: NP_477026.1
• Gene: repo / 47285
• FlyBaseID: FBgn0011701
• Length: 612
• Species: Drosophila melanogaster
• Sequence 2: NP_524825.1
• Gene: E5 / 45396
• FlyBaseID: FBgn0008646
• Length: 524
• Species: Drosophila melanogaster
• Alignment Length: 676
• Identity: 130/676 - (19%)
• Similarity: 196/676 - (28%)
• Gaps: 307/676 - (45%)

  Fly     8 DPIFGEFG--GGPLN--------PLGAKPLMPTTTAMHPVMLGSVHELC--------SQQQQQQQ 54
            |.|.||..  ..||.        |....|..||.|..........:..|        |:..|:..
  Fly    55 DSIVGESSTRSAPLRVSVISSPPPRSESPASPTNTNNSGRRTPRGYIYCRRRDSLDRSRSPQRSP 119

  Fly    55 QQRLPDCNTILPNGGGGGAGSG----------GAGGSPNYVTKLDF-------------VNKMGC 96
            ..|.|.    .||.||..|.:|          |.|..|..:..|..             .|.|..
  Fly   120 VSRSPS----PPNAGGNPAAAGNTAKSGDPSSGTGNPPTLIRPLPLPAPNLALIGNRTSPNAMAV 180

  Fly    97 ------YSPSQKYEYISAPQKLVEQQQQQQHHHQHHQHYTATPPPSHNGILLHKQSSQQQQQQQQ 155
                  :.|||...:::|.   .:......||||                       ||||||||
  Fly   181 RMAGPPHPPSQPPPFLAAQ---FQMAAALAHHHQ-----------------------QQQQQQQQ 219

  Fly   156 QLVGILDYHPLN-------GKLD---YSSSPKDQYEPQQLQHLYGGSPHHLDHLDHGSDGLLQDS 210
            ||..:....|..       |::.   :...|...:.|....|.:|.:||           |::||
  Fly   220 QLPPVPTGPPHGPHPHLPPGQIPLGIFPGGPHPGHPPPHGHHPFGSAPH-----------LIRDS 273

  Fly   211 SPVMINGGSAGGKL--KKPDEMCSQLEAGGAGVTPPSSSSTVVNGTTNGTGNANSSSSAGVGIQG 273
            .|:.....|..|::  :.|.....|
  Fly   274 YPLYPWLLSRHGRIFPRFPGNFLFQ---------------------------------------- 298

  Fly   274 AAGTAGGVAAPAAKKDGSSSKKKGDPNGIKKKKTRTTFTAYQLEELERAFERAPYPDVFAREELA 338
                      |..                |.|:.||.|:..||.:||.|||...|.....|::||
  Fly   299 ----------PFR----------------KPKRVRTAFSPTQLLKLEHAFEGNHYVVGAERKQLA 337

  Fly   339 IKLNLSESRVQVWFQNRRAKWRKHEPPRKTGYIKTSTPPTATLNPGTLAPPFTSYPQTTTVTPPG 403
            ..|:|:|::|:|||||||.   ||:..::.|
  Fly   338 QGLSLTETQVKVWFQNRRT---KHKRMQQEG---------------------------------- 365

  Fly   404 SMDSWTSYQTPYELTPQFSLLSPAASPYGTYSGQYGAYVHESQLFPMRHYEYGSPTRMEMGATT- 467
                                            |.                  ||.|:...|:::
  Fly   366 --------------------------------GD------------------GSDTKSNKGSSSG 380

  Fly   468 GSVAGNGDESVANGG---SYQTA-------ELQTAQQQQLAD----GTLVTVHAHQQQQQQQQQL 518
            |...|:|::...:.|   ||:.|       |::...:.::.|    |:.:....||:.::|.||
  Fly   381 GGGGGDGEDDAKHDGSQHSYEDAEDPEDEDEIEEDDEDEVIDMDDYGSEMDAEEHQRLREQFQQ- 444

  Fly   519 NGKYLSAEEAKYVHLQCHQSGGGLELSPGASCHLVEAQGQHYVTTATGGAASAGGTSSDDNDSGG 583
               .|:..:.:::.   ..:|....|||.....|::...||.
  Fly   445 ---QLAQHQQQFMQ---QNAGEAATLSPQQQHQLLQQHQQHL----------------------- 480

  Fly   584 MQTVIKSEEVSQQQQ---QQQGQSYV 606
                  .::..||||   |||.|.|:
  Fly   481 ------QQQHHQQQQHFIQQQQQLYL 500

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
repo	NP_477026.1	Homeodomain	313..361	CDD:459649	22/47 (47%)
E5	NP_524825.1	Homeodomain	304..360	CDD:459649	28/58 (48%)