Protein Alignment repo and Dr

DIOPT Version :10

• Sequence 1: NP_477026.1
• Gene: repo / 47285
• FlyBaseID: FBgn0011701
• Length: 612
• Species: Drosophila melanogaster
• Sequence 2: NP_477324.1
• Gene: Dr / 45285
• FlyBaseID: FBgn0000492
• Length: 515
• Species: Drosophila melanogaster
• Alignment Length: 472
• Identity: 97/472 - (20%)
• Similarity: 149/472 - (31%)
• Gaps: 192/472 - (40%)

  Fly    59 PDCNTILPNGGGGGAGSGGAGGSPNYVTKLDFVNKMGCY-----------SPS-----QKYEYIS 107
            |..|.|:.:.......:.|:..|...:|..:..|....:           |||     .:...:.
  Fly    30 PAGNLIITSSSSNSGSNSGSNMSSGNMTSSNLTNLSPSHPAGLNALASPTSPSALLLAHQQHLLQ 94

  Fly   108 APQKLVEQQQQQQ----------HHHQHHQHYT-------------------------------- 130
            ..|:..:||||||          |...||.|.|
  Fly    95 QHQQHQQQQQQQQQAAALQLAAVHPPAHHLHKTTSRLSNFSVASLLADTRPRTPPNQAADGPQNL 159

  Fly   131 -------------ATPPP-------------------SHNGILL------------HKQSSQQQQ 151
                         :||||                   :|:..||            |:..:.|.:
  Fly   160 TSSAATSPISQASSTPPPPPASAAAQVPANTFHPAAVAHHAHLLQAAHAAAAAHAQHQAMAAQLR 224

  Fly   152 QQQQQLVGILDYHPLNGKLDYSSSP------------------------------KDQYEPQQLQ 186
            |||||.....:..|.:.....||:|                              :.:|:.:.||
  Fly   225 QQQQQADARANSPPASTSSTPSSTPLGSALGSQGNVASTPAKNERHSPLGSHTDSELEYDEEMLQ 289

  Fly   187 HLYGGSPHHLDHLDHGSDGLLQ------DSSPVMINGG--SAGGKLKKPDEMCSQLEAGGAGVTP 243
                  .|..|| |...|.::.      |.||.....|  .:|..|:.|..            .|
  Fly   290 ------DHEADH-DEEEDSIVDIEDMNADDSPRSTPDGLDGSGKSLESPHG------------PP 335

  Fly   244 PSS--SSTVVNGTTNGTGNANSSSSAGVGIQGAA----GTAGGVAAPAAKK-------------- 288
            |.|  .||:::.....:|:.....:....:..||    |..|||..|..::
  Fly   336 PGSHMQSTILSPAALASGHVPIRPTPFSALAAAAVAWTGMGGGVPWPGTRQMPPFGPPGMFPGAG 400

  Fly   289 -DGSSSK--------KKGDPNGIKKKKTRTTFTAYQLEELERAFERAPYPDVFAREELAIKLNLS 344
             .|.:::        :|..||    :|.||.||..||..||:.|....|..:..|.|.:..|.|:
  Fly   401 FGGDANEPPRIKCNLRKHKPN----RKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSLRLT 461

  Fly   345 ESRVQVWFQNRRAKWRK 361
            |::|::||||||||.::
  Fly   462 ETQVKIWFQNRRAKAKR 478

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
repo	NP_477026.1	Homeodomain	313..361	CDD:459649	20/47 (43%)
Dr	NP_477324.1	Homeodomain	422..478	CDD:459649	25/55 (45%)