Sequence 1: | NP_477026.1 | Gene: | repo / 47285 | FlyBaseID: | FBgn0011701 | Length: | 612 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_012825755.1 | Gene: | pax3 / 448464 | XenbaseID: | XB-GENE-482740 | Length: | 486 | Species: | Xenopus tropicalis |
Alignment Length: | 548 | Identity: | 146/548 - (26%) |
---|---|---|---|
Similarity: | 201/548 - (36%) | Gaps: | 151/548 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 133 PPPSHN----GILLHKQSSQQQQQQQQQLVGILDYHPLNGKLDYSSSPKDQYEPQQLQHLYGGSP 193
Fly 194 HH---------LDHLDHG--SDGLLQDSSPVMINGGSAGGKLKK----PD--------------- 228
Fly 229 ---EMCSQLEAGGA---GVTPPSSSSTVVNGTTNGTGN-----------ANSSSSAGVGIQGAAG 276
Fly 277 TAGGVAAPAA--KKDGSSSKKKGD-PNGIKKKKTRTTFTAYQLEELERAFERAPYPDVFAREELA 338
Fly 339 IKLNLSESRVQVWFQNRRAKWRKHEPPRK----TGYIKTSTPPTATLNPGTLAPPFTSYPQTTTV 399
Fly 400 TPPGSMDSWTSYQTPYELTP----QFSLLS--PAASPYGTYSGQYGAYVHESQLFPMRHYEYGSP 458
Fly 459 TRMEMGATTGSVAGNGDESVANGGSYQTAELQTAQQQQLADGTLVTVHA---HQQQQQQQQQLNG 520
Fly 521 KYLSAEEAKYVHLQCHQSGGGLE--LSPGASCHLVEAQGQHYVTTATGGAASAGGTSSDDNDSGG 583
Fly 584 MQTVIKSEEVSQQQQQQQGQS---YVLP 608 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
repo | NP_477026.1 | Homeobox | 313..360 | CDD:278475 | 32/46 (70%) |
pax3 | XP_012825755.1 | PAX | 35..162 | CDD:238076 | 27/140 (19%) |
Homeobox | 224..278 | CDD:365835 | 38/53 (72%) | ||
Pax7 | 349..393 | CDD:372070 | 11/60 (18%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000011 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.910 |