DRSC/TRiP Functional Genomics Resources

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Protein Alignment repo and dmbx2

DIOPT Version :10

Sequence 1:NP_477026.1 Gene:repo / 47285 FlyBaseID:FBgn0011701 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_001003563.1 Gene:dmbx2 / 445169 ZFINID:ZDB-GENE-040801-82 Length:266 Species:Danio rerio


Alignment Length:62 Identity:34/62 - (54%)
Similarity:49/62 - (79%) Gaps:0/62 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   300 NGIKKKKTRTTFTAYQLEELERAFERAPYPDVFAREELAIKLNLSESRVQVWFQNRRAKWRK 361
            |..|::::||.|:..||:.||:||::..||||..||.||:.:||.|:|:||||:|||||:||
Zfish    67 NQQKQRRSRTAFSVSQLQALEKAFQQTQYPDVGMRERLAVCINLPEARIQVWFKNRRAKFRK 128

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
repoNP_477026.1 Homeodomain 313..361 CDD:459649 27/47 (57%)
dmbx2NP_001003563.1 Homeodomain 72..128 CDD:459649 30/55 (55%)

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