Protein Alignment repo and toy

DIOPT Version :9

• Sequence 1: NP_477026.1
• Gene: repo / 47285
• FlyBaseID: FBgn0011701
• Length: 612
• Species: Drosophila melanogaster
• Sequence 2: NP_001368990.1
• Gene: toy / 43833
• FlyBaseID: FBgn0019650
• Length: 655
• Species: Drosophila melanogaster
• Alignment Length: 674
• Identity: 151/674 - (22%)
• Similarity: 231/674 - (34%)
• Gaps: 185/674 - (27%)

  Fly    16 GGPLNPLGAKPLMPTTTAMHPVM--LGSVH----ELCSQQQQQ-----QQQQRLPDCNTILPNGG 69
            |.|.:.:|...|...:||.|..:  ||.|:    .|....:|:     ....|..|.:.||....
  Fly    11 GHPHSSVGQSTLFGCSTAGHSGINQLGGVYVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSN 75

  Fly    70 G------------GGAGSGGAGGSPNYVTKLDFVNKMGCYS---PSQKYEYISAPQKLVEQQQQQ 119
            |            |.......|||...|.....|.|:..|.   || .:.:....:.|.||....
  Fly    76 GCVSKILGRYYETGSIKPRAIGGSKPRVATTPVVQKIADYKRECPS-IFAWEIRDRLLSEQVCNS 139

  Fly   120 QHHHQHHQHYTATPPPSHNGILLHKQSSQQQQQQQQQLVGILDYHPLNGKLDYSSSPKDQYEPQQ 184
            .:          .|..|....:|...:||::||.|||...:                   ||..:
  Fly   140 DN----------IPSVSSINRVLRNLASQKEQQAQQQNESV-------------------YEKLR 175

  Fly   185 LQHLYGGSPHHLDHLDHGSDGLLQDSSPVMINGGSAGGKLKKPDEMCSQLEAGGAGVTPPSSSST 249
                                         |.||.:.|......:...:.|      ..||::|
  Fly   176 -----------------------------MFNGQTGGWAWYPSNTTTAHL------TLPPAAS-- 203

  Fly   250 VVNGTTNGTGNANSSSSAGVGIQGAAGTAGGVAAPAAKKDGSSSKKKGDPNG-----IKKK--KT 307
            ||....|.:|.|:........:|.:...:...:..:.....|.....||.:.     :|:|  :.
  Fly   204 VVTSPANLSGQADRDDVQKRELQFSVEVSHTNSHDSTSDGNSEHNSSGDEDSQMRLRLKRKLQRN 268

  Fly   308 RTTFTAYQLEELERAFERAPYPDVFAREELAIKLNLSESRVQVWFQNRRAKWRKHEPPRK----- 367
            ||:|:..|::.||:.|||..||||||||.||.|:.|.|:|:||||.|||||||:.|..|.
  Fly   269 RTSFSNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVWFSNRRAKWRREEKMRTQRRSA 333

  Fly   368 -----TGYIKTSTPPTATLNPGTLAPPFTSYP-----------QTTTVTPPGSM----------- 405
                 :|...|:..|:.|....::|....|.|           :|::.....|:
  Fly   334 DTVDGSGRTSTANNPSGTTASSSVATSNNSTPGIVNSAINVAERTSSALVSNSLPEASNGPTVLG 398

  Fly   406 ----DSWTSYQTPYELTPQFSLLSPAASPYGTYSGQYGAYVHESQLFPMRHYEYGSPTRMEMGAT 466
                .:.||.::|    |    |.|||......||....|....|........|.|    .:|:.
  Fly   399 GEANTTHTSSESP----P----LQPAAPRLPLNSGFNTMYSSIPQPIATMAENYNS----SLGSM 451

  Fly   467 TGSVAGNGD-------ESVANGGSYQTAELQTAQQQQLADGTLVTVHAHQQQQQQQQQLNGKYLS 524
            |.|.....|       :.::.|..|.:|..:.......|        ||||..|     :|.|.:
  Fly   452 TPSCLQQRDAYPYMFHDPLSLGSPYVSAHHRNTACNPSA--------AHQQPPQ-----HGVYTN 503

  Fly   525 AEEAKYVHLQCHQSGGGLELSPGASCHLVEAQGQHYVTTATGG-------AASAGGTSSDDNDSG 582
            :....       .|..|: :|.|.|.. |:...|: |:..||.       .:|..|:..|.....
  Fly   504 SSPMP-------SSNTGV-ISAGVSVP-VQISTQN-VSDLTGSNYWPRLQXSSIFGSPLDHLSKA 558

  Fly   583 GMQTVIKSEEVSQQQQQQQGQSYV 606
            ....:|.::...:..:.::..|.|
  Fly   559 TAAAIIAAQAAEKSHKHRKEHSIV 582

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
repo	NP_477026.1	Homeobox	313..360	CDD:278475	29/46 (63%)
toy	NP_001368990.1	PAX	29..153	CDD:128645	26/134 (19%)
		COG5576	<253..368	CDD:227863	45/114 (39%)
		Homeobox	269..322	CDD:395001	33/52 (63%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	55	1.000	Domainoid score	I4097
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R6207
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.940