Protein Alignment repo and ftz

DIOPT Version :10

• Sequence 1: NP_477026.1
• Gene: repo / 47285
• FlyBaseID: FBgn0011701
• Length: 612
• Species: Drosophila melanogaster
• Sequence 2: NP_477498.1
• Gene: ftz / 40834
• FlyBaseID: FBgn0001077
• Length: 410
• Species: Drosophila melanogaster
• Alignment Length: 452
• Identity: 90/452 - (19%)
• Similarity: 151/452 - (33%)
• Gaps: 134/452 - (29%)

  Fly    81 SPNYVTKLDFVNKMGCYSP-------------SQKYEYISAPQKLVEQQQQQQ--HHHQHHQHYT 130
            |.::.:..|.:|....|.|             :..|:..|..|....|:...:  :::.:.:..|
  Fly     6 SQSHYSYADNMNMYNMYHPHSLPPTYYDNSGSNAYYQNTSNYQGYYPQESYSESCYYYNNQEQVT 70

  Fly   131 ---------ATPPPSHNGILLHKQSSQQQQQQQQQLVGILDYHPLN---------GKLDY----- 172
                     .||||        |.:.::.:.....::..::..|..         .||.|
  Fly    71 TQTVPPVQPTTPPP--------KATKRKAEDDAASIIAAVEERPSTLRALLTNPVKKLKYTPDYF 127

  Fly   173 -----------------SSSPKDQYEPQQLQHLYGGSPHHLDHLDHGSDGLLQDSSPVMINGGSA 220
                             ::||...|:.:.:......:...:|:||
  Fly   128 YTTVEQVKKAPAVSTKVTASPAPSYDQEYVTVPTPSASEDVDYLD-------------------- 172

  Fly   221 GGKLKKPDEMCSQLEAGGAGVTPPSSSSTV--VNGTTNGTGNANSSSSAGVG------IQGAAGT 277
               :..|.....:|:.|.....||::.:::  :.|.:....:....||:.|.      |..|...
  Fly   173 ---VYSPQSQTQKLKNGDFATPPPTTPTSLPPLEGISTPPQSPGEKSSSAVSQEINHRIVTAPNG 234

  Fly   278 AGGVAAPAAKKDGSSSKKKGDPNGIKKKKTRTTFTAYQLEELERAFERAPYPDVFAREELAIKLN 342
            ||.......::..:|..|       ..|:||.|:|.||..|||:.|....|.....|.::|..|:
  Fly   235 AGDFNWSHIEETLASDCK-------DSKRTRQTYTRYQTLELEKEFHFNRYITRRRRIDIANALS 292

  Fly   343 LSESRVQVWFQNRRAKWRK----HEPPRK--TGYIKTSTPPTATLNPGTLAP----PFTSYPQTT 397
            |||.::::||||||.|.:|    ...|..  .||.....|..||....|.||    |...:.|||
  Fly   293 LSERQIKIWFQNRRMKSKKDRTLDSSPEHCGAGYTAMLPPLEATSTATTGAPSVPVPMYHHHQTT 357

  Fly   398 TVTPP---------GSMDSWTSYQT--PYELTPQFSLLSPAASPYGTYSGQYGAYVHESQLF 448
            ...|.         |.::.:...||  .|:..||            .|..|.....|...|:
  Fly   358 AAYPAYSHSHSHGYGLLNDYPQQQTHQQYDAYPQ------------QYQHQCSYQQHPQDLY 407

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
repo	NP_477026.1	Homeodomain	313..361	CDD:459649	20/47 (43%)
ftz	NP_477498.1	FTZ	1..248	CDD:397787	38/272 (14%)
		Homeodomain	255..311	CDD:459649	25/55 (45%)
		KLF1_2_4_N	<321..404	CDD:425360	22/94 (23%)