Protein Alignment repo and Dfd

DIOPT Version :10

• Sequence 1: NP_477026.1
• Gene: repo / 47285
• FlyBaseID: FBgn0011701
• Length: 612
• Species: Drosophila melanogaster
• Sequence 2: NP_477201.1
• Gene: Dfd / 40832
• FlyBaseID: FBgn0000439
• Length: 586
• Species: Drosophila melanogaster
• Alignment Length: 596
• Identity: 128/596 - (21%)
• Similarity: 176/596 - (29%)
• Gaps: 224/596 - (37%)

  Fly    68 GGGGGAGS---GGAG---GSPNYVTKLDFVNKMGCYSPSQKYEYISAPQKLVEQQQQQQHHHQHH 126
            |||.|.||   ||||   |.|:.:...|.|:           :|::             |||..|
  Fly    57 GGGAGVGSVGGGGAGGMTGHPHSMHPADMVS-----------DYMA-------------HHHNPH 97

  Fly   127 QHYTATPPPSHNGILLHKQSSQQQQQQQQQLVGILDYHPLNGKLDYSSSPKDQYEPQQLQHLYGG 191
            .|     ..||...|.|..|:.......|...|           .|||:..:...|..
  Fly    98 SH-----SHSHTHSLPHHHSNSAISGHHQASAG-----------GYSSNYANATPPSH------- 139

  Fly   192 SPHHLDHL-DHGSDGLLQDSSPVMI-----------------------NGGSAGGKLKKPDEMCS 232
             ||...|. .|.|.|.....:|..|                       |||..||         |
  Fly   140 -PHSHPHAHPHQSLGYYVHHAPEFISAGAVHSDPTNGYGPAANVPNTSNGGGGGG---------S 194

  Fly   233 QLEAGGAGVTPPSSSSTVVNGTTNGTGNANSSSSAGVGIQGAAG--------------------- 276
            ....||..|  ..|::....|...|.|.||.|    ||...:.|
  Fly   195 GAVLGGGAV--GGSANGYYGGYGGGYGTANGS----VGSTHSQGHSPHSQMMDLPLQCSSTEPPT 253

  Fly   277 -TAGGV-------------AAPA-----------------AKKDGSSSKKK-------------- 296
             ||.|:             |.||                 ::.|..|.:.:
  Fly   254 NTALGLQELGLKLEKRIEEAVPAGQQLQELGMRLRCDDMGSENDDMSEEDRLMLDRSPDELGSND 318

  Fly   297 -----GDPN-----------------------------------GIKKKKTRTTFTAYQLEELER 321
                 ||.:                                   |::.|:.||.:|.:|:.|||:
  Fly   319 NDDDLGDSDSDEDLMAETTDGERIIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEK 383

  Fly   322 AFERAPYPDVFAREELAIKLNLSESRVQVWFQNRRAKWRKHEPPRKTGYIKTSTPPTATLNPGTL 386
            .|....|.....|.|:|..|.|||.::::||||||.||:|......|..::..| ..|..||..:
  Fly   384 EFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNKLPNTKNVRKKT-VDANGNPTPV 447

  Fly   387 APPFTSYPQTTTVTPPGSMDSWTSYQTPYELTPQFS--LLSPAASPYGTYSGQYG------AYVH 443
            |...|.  :..:.....:.....|.|...:.||..:  :.|.:....|..|...|      |...
  Fly   448 AKKPTK--RAASKKQQQAQQQQQSQQQQTQQTPVMNECIRSDSLESIGDVSSSLGNPPYIPAAPE 510

  Fly   444 ESQLFPMRHYEYGSPTRMEMGATTGSVAGNGDESVANGGSYQTAELQTAQQQQLADGTLVTVHAH 508
            .:..:|      ||...:......||  ||.:.:..|..|.........|...      ..:|.|
  Fly   511 TTSSYP------GSQQHLSNNNNNGS--GNNNNNNNNNNSNLNNNNNNNQMGH------TNLHGH 561

  Fly   509 QQQQQQQQQLN 519
            .||||.....|
  Fly   562 LQQQQSDLMTN 572

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
repo	NP_477026.1	Homeodomain	313..361	CDD:459649	21/47 (45%)
Dfd	NP_477201.1	Homeodomain	367..423	CDD:459649	25/55 (45%)