Protein Alignment repo and toe

DIOPT Version :9

• Sequence 1: NP_477026.1
• Gene: repo / 47285
• FlyBaseID: FBgn0011701
• Length: 612
• Species: Drosophila melanogaster
• Sequence 2: NP_524041.2
• Gene: toe / 39418
• FlyBaseID: FBgn0036285
• Length: 640
• Species: Drosophila melanogaster
• Alignment Length: 687
• Identity: 146/687 - (21%)
• Similarity: 228/687 - (33%)
• Gaps: 284/687 - (41%)

  Fly    10 IFGEFGGGPLNPLGAKPLMPT--TTAM---H------PVM------------------------- 38
            :.|...||...|....|:.||  ||.:   |      |::
  Fly    55 LLGSSAGGVGQPAAITPVSPTAATTVLAQPHSLSPSTPILTQGAPPAAALGGIFCGGSAAAGPGA 119

  Fly    39 ----------LGSVHEL------------CSQQQQQQQQQRLPDCNTILPNGGGGGAGSGGAGGS 81
                      |.|.|.|            .:|....||........|:.|.|..||:....|  :
  Fly   120 AAAAATNLNALASQHRLLELSRFGLRGYDLAQHMLSQQGAVSKLLGTLRPPGLIGGSKPKVA--T 182

  Fly    82 PNYVTKLD-----------------FVNKMGC---YSPSQKYEYISAPQKLVEQQQQQQH----- 121
            |..|:|::                 .:.:..|   .:||     :|:..:::..:..::.
  Fly   183 PTVVSKIEQYKRENPTIFAWEIRERLITEGVCTNATAPS-----VSSINRILRNRAAERAAAEFA 242

  Fly   122 ---------HHQHHQHYTATPP-PSHNGILLHKQSSQQQQQQQQQLVGILDYHPLNGKLDYSSSP 176
                     |..|...||:.|. |:|                          |||.|.:..::.|
  Fly   243 RAASYGYAIHPTHPHPYTSFPTWPAH--------------------------HPLWGAVPLATPP 281

  Fly   177 KDQYEPQQLQHLYGGSPHHLDHLDHGSDGLLQDSSPVMINGGSAGGKLKKPDEMCSQLEAGGAGV 241
                         ||.|       .|:.|.||...    :|.|.|..             |....
  Fly   282 -------------GGGP-------AGAGGALQPGG----SGSSYGSD-------------GNMSS 309

  Fly   242 TPPSSSSTVVNGTTNGTGNANSSSSAGVGIQGAAGTAGGVAAPAAKKDGSSSKKKG--------- 297
            .|.||:|    .||:..|: |::|.:|.| ..:|| :|.::.||...|..|...:.
  Fly   310 NPNSSNS----NTTHSNGH-NTNSGSGCG-DSSAG-SGRLSLPALSPDSGSRDSRSPDADANRMI 367

  Fly   298 ----------DPNGIKKKKTRTTFTAYQLEELERAFERAPYPDVFAREELAIKLNLSESRVQVWF 352
                      |.:..|.::.||||:..||:|||:.|:::.||.|..||:||.:..|||:||||||
  Fly   368 DIEGEDSESQDSDQPKFRRNRTTFSPEQLDELEKEFDKSHYPCVNTREKLAARTALSEARVQVWF 432

  Fly   353 QNRRAKWRKHEPPRKTGYIKTSTPPTATLNPGTLAPPFTS----------------------YPQ 395
            .|||||||:|:   :...||....|:.:.:|..|..|..|                      ||.
  Fly   433 SNRRAKWRRHQ---RVNLIKQRDSPSTSSSPTPLVNPVVSPVSPIPVPVPVAVPESGQQKQPYPY 494

  Fly   396 TT-----------------TVTPPGSMDSWT----SYQTPYELTPQFSLLSPAASPYGTYSGQYG 439
            :|                 |:.|...|.|.|    |.|...|.....:..||.||...:..|:..
  Fly   495 STSNMCNTSSSSSNSQPCNTINPGSKMSSKTSSVSSNQHMEEPAAAVATASPTASAPLSMGGENS 559

  Fly   440 AYVHESQLFPM-----------------RHY--EY-GSPTRMEMGATTGSVAGNGDESV--ANGG 482
            |:.......||                 |.|  :| |:|..:          |:|...:  .:|.
  Fly   560 AFRALPMTLPMPMTLPTASAAAFALSFARQYIAKYMGTPLNL----------GHGSSPIQAQSGR 614

  Fly   483 SYQTAELQTAQQQQLADGTLVTVHAHQQQQQQQQQLN 519
            .:|:.|.:                 ::.:|::::.:|
  Fly   615 DHQSEERE-----------------YEDEQEEEEVIN 634

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
repo	NP_477026.1	Homeobox	313..360	CDD:278475	27/46 (59%)
toe	NP_524041.2	HTH	134..230	CDD:304362	18/102 (18%)
		Homeobox	388..440	CDD:278475	31/51 (61%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45450825
Domainoid	1	1.000	55	1.000	Domainoid score	I4097
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000011
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	4	3.840