Protein Alignment repo and exex

DIOPT Version :10

• Sequence 1: NP_477026.1
• Gene: repo / 47285
• FlyBaseID: FBgn0011701
• Length: 612
• Species: Drosophila melanogaster
• Sequence 2: NP_648164.1
• Gene: exex / 38884
• FlyBaseID: FBgn0041156
• Length: 525
• Species: Drosophila melanogaster
• Alignment Length: 482
• Identity: 83/482 - (17%)
• Similarity: 136/482 - (28%)
• Gaps: 234/482 - (48%)

  Fly   107 SAPQKL----VEQQQQQQHHHQHHQ----------------------HYTATPP---PSHNGILL 142
            |.|.:|    ::......||.:.||                      ..|.:||   |:|:....
  Fly    22 SMPSQLLLSHIQHHSSSLHHQRSHQRSSPPAQDYDQGSNQSTLSPRSQITPSPPAASPTHSAATT 86

  Fly   143 ---------------HKQSSQQQQQQQQQLVGILDYHPLNGKLDYSSSPKDQYEPQQLQHLYGGS 192
                           .:.|||.:..|..|:..::...|:      .:.|...:.|.....||...
  Fly    87 GSPVSTYTPALSPGGAQDSSQTESGQSSQMPLLVAPMPV------GTGPPHSHPPPPHPRLYVEG 145

  Fly   193 ---PHHLDHLDHGSDG--------LLQDSSPVMINGGSAGGKLKKPDEMCSQLEAGGAGVT---- 242
               |||:.| .|.:.|        |:..::|..:..|:|......|....:.|...||.:.
  Fly   146 FPPPHHVPH-PHPALGTYPLPRLPLMLPANPPGVPSGAAAPPPVSPQPAANHLSHSGATMATTTL 209

  Fly   243 -PPSSS--------STVVNGTTNGTGNAN-------------------------SSSSAGVGIQG 273
             ||:.|        ..::..:.:.:|...                         ::|:|....|.
  Fly   210 LPPAQSQPKKSFCIDALLAKSQHQSGEPQPIIVDDRLAALHYARDQAELNHAFVTASNAAAAAQA 274

  Fly   274 AAGTAGGVA-------------------------------------------------------- 282
            ||..|||::
  Fly   275 AASAAGGISEQEALQRIRDSREYDSPSPDGMSRSESPTSSHRSSPPISPGCEDQQQPHGALHPQH 339

  Fly   283 -------------------APAAKKD----------------GSSSKKKGDPNGI---------- 302
                               :|...:|                ||:..:..||:|.
  Fly   340 LSMRMSDFHDEFKKPIPPHSPIRPQDFPLYAGGHPYQLLAQGGSAFHRPLDPSGKPIPIPMGHNF 404

  Fly   303 ---------------------------------KKKKTRTTFTAYQLEELERAFERAPYPDVFAR 334
                                             |.::.||.||:.||.|||:.|::..|.....|
  Fly   405 MPSQLQFEFLARAGMLHHRIPELAAYPHHAILGKTRRPRTAFTSQQLLELEKQFKQNKYLSRPKR 469

  Fly   335 EELAIKLNLSESRVQVWFQNRRAKWRK 361
            .|:|..|.|||::|::||||||.||::
  Fly   470 FEVASGLMLSETQVKIWFQNRRMKWKR 496

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
repo	NP_477026.1	Homeodomain	313..361	CDD:459649	23/47 (49%)
exex	NP_648164.1	Homeodomain	440..496	CDD:459649	27/55 (49%)