Protein Alignment repo and Rhox12

DIOPT Version :10

• Sequence 1: NP_477026.1
• Gene: repo / 47285
• FlyBaseID: FBgn0011701
• Length: 612
• Species: Drosophila melanogaster
• Sequence 2: NP_001020254.1
• Gene: Rhox12 / 382282
• MGIID: 2685994
• Length: 186
• Species: Mus musculus
• Alignment Length: 189
• Identity: 56/189 - (29%)
• Similarity: 79/189 - (41%)
• Gaps: 42/189 - (22%)

  Fly   193 PHHLD---------------HLDHGSDGLLQDSSPVMINGGSAG-GKLKKPDEMCSQLEAGGAGV 241
            |||:|               ..|..:||..:        |||.| |.|...|::..|      |:
Mouse     5 PHHVDPNFYKLGENEIEVTLDADQEADGAAE--------GGSFGDGSLNGSDKLKCQ------GI 55

  Fly   242 TPPSSSSTVVNGTTNGTGNANSSSSAGVGIQGAAGTAGGVAAPAAKKDGSSSKKKGDPNGIKKKK 306
             |......:..|.....||.......| ..||:     |...|..|:..|::.:...   :::.:
Mouse    56 -PDDKDDVIYVGELKNIGNDIKDECHG-SHQGS-----GDPQPEEKQKNSAAARVPQ---VRRTR 110

  Fly   307 TRTT--FTAYQLEELERAFERAPYPDVFAREELAIKLNLSESRVQVWFQNRRAKWRKHE 363
            .|..  ||..||.|||..||:..|||...|:.||..|.|:||:||.||:.|||.:||.:
Mouse   111 PRIQLGFTPRQLNELEDFFEKTKYPDALTRKNLAKHLYLAESKVQRWFKKRRAHYRKEQ 169

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
repo	NP_477026.1	Homeodomain	313..361	CDD:459649	24/47 (51%)
Rhox12	NP_001020254.1	homeodomain	107..169	CDD:238039	29/61 (48%)