Protein Alignment repo and PHDP

DIOPT Version :10

• Sequence 1: NP_477026.1
• Gene: repo / 47285
• FlyBaseID: FBgn0011701
• Length: 612
• Species: Drosophila melanogaster
• Sequence 2: NP_523834.1
• Gene: PHDP / 37788
• FlyBaseID: FBgn0025334
• Length: 220
• Species: Drosophila melanogaster
• Alignment Length: 189
• Identity: 64/189 - (33%)
• Similarity: 89/189 - (47%)
• Gaps: 48/189 - (25%)

  Fly   190 GGSPHHLDHLDHGSDGLLQDSS-PVMINGGSAGGKLKKPDEMCSQLEAGGAGVTPPSSSSTVVN- 252
            ||.....:|::|.:  |:.||| .:..|..:..|.|.:...:.             .|..|.|:
  Fly    30 GGGLSVANHINHYN--LMIDSSYKLCANESAIRGSLNQESSLL-------------FSKITTVSE 79

  Fly   253 --GTTNGTGNANSS---SSAGVGIQGAAGTAGGVAAPAAKKDGSSSKKKGDPNGIKKKKTRTTFT 312
              ..|:..|:.|:.   .|.|                   .||.|...|.     |:::.|||||
  Fly    80 FYPATHNIGSYNTDFHLKSYG-------------------DDGLSLTDKS-----KQRRIRTTFT 120

  Fly   313 AYQLEELERAFERAPYPDVFAREELAIKLNLSESRVQVWFQNRRAKWRKHEPPRKTGYI 371
            :.||.|||:.|....|||::.|||:|.||:|:|:||||||||||||:||.|  |...||
  Fly   121 SNQLNELEKIFLETHYPDIYTREEIASKLHLTEARVQVWFQNRRAKFRKQE--RHAIYI 177

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
repo	NP_477026.1	Homeodomain	313..361	CDD:459649	29/47 (62%)
PHDP	NP_523834.1	Homeodomain	113..169	CDD:459649	34/55 (62%)