DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment repo and otp

DIOPT Version :9

Sequence 1:NP_477026.1 Gene:repo / 47285 FlyBaseID:FBgn0011701 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_001286654.1 Gene:otp / 37364 FlyBaseID:FBgn0015524 Length:416 Species:Drosophila melanogaster


Alignment Length:419 Identity:126/419 - (30%)
Similarity:168/419 - (40%) Gaps:143/419 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   176 PKDQYEPQ-QLQHLYGG---------SPHHLDHLDHGSDGLLQDSSPVMINGGSAGGKLKKPDEM 230
            |||...|: .|..|:.|         .|:..| |..|:.|           |||:||        
  Fly    12 PKDCDLPKAALTALHAGVNSFGQLPVGPNLAD-LGGGAGG-----------GGSSGG-------- 56

  Fly   231 CSQLEAGGAGVTPPSSS------STVVNGTTNGTGNANSSSSAGVGIQGAAGTAGGVAAPAAKKD 289
               :..|| ||.....|      |..:||....:||.|.:::.|.|                 .:
  Fly    57 ---VPVGG-GVARLHISGGLCDNSNALNGGNGSSGNGNGNNNNGNG-----------------NN 100

  Fly   290 GSSSKKKG---DPNGIKKKKTRTTFTAYQLEELERAFERAPYPDVFAREELAIKLNLSESRVQVW 351
            .:|.:::.   |.|  |:|:.||.||..||.||||.|.:..|||:|.|||:|:::.|:|||||||
  Fly   101 NNSMQQQDQHLDKN--KQKRHRTRFTPAQLNELERCFSKTHYPDIFMREEIAMRIGLTESRVQVW 163

  Fly   352 FQNRRAKWRKHEPPRKTGYIKTSTPPTATLNPGTLAPPF----TSYPQTTTVTPPGSM--DSWTS 410
            ||||||||:|.:  :.|...:|   |.|.| |....|||    |:......:...|..  |.|:.
  Fly   164 FQNRRAKWKKRK--KTTNVFRT---PGALL-PSHGLPPFGANITNIAMGDGLCGTGMFGGDRWSV 222

  Fly   411 YQTPYELTPQFSLL---SPAASPY--GTYSG-------QYGAYVHE--SQLFPMRHYEY------ 455
            ...|  :|..|..|   ||.:|..  |..||       ..|:|.|.  :.|.....|::      
  Fly   223 GVNP--MTAGFGQLNQSSPLSSSLNSGLNSGINMGSALGAGSYQHYGLNALGDSMMYQHSVGGVS 285

  Fly   456 ----GSPTRMEMGATTG--------------SVAGNGDESVANGGSYQTAELQTAQQQQLADGTL 502
                |||:     |||.              |...|..::..||   :...|...||||      
  Fly   286 CGPSGSPS-----ATTPPNMNSCSSVTPPPLSAQPNSSQNELNG---EPMPLHQQQQQQ------ 336

  Fly   503 VTVHAHQQQQ-------------QQQQQL 518
              .|.|||||             ||||||
  Fly   337 --THQHQQQQTHQHHPMAPPTPTQQQQQL 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
repoNP_477026.1 Homeobox 313..360 CDD:278475 30/46 (65%)
otpNP_001286654.1 Homeobox 119..167 CDD:278475 29/47 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450949
Domainoid 1 1.000 55 1.000 Domainoid score I4097
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.930

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