Protein Alignment repo and Alx3

DIOPT Version :10

• Sequence 1: NP_477026.1
• Gene: repo / 47285
• FlyBaseID: FBgn0011701
• Length: 612
• Species: Drosophila melanogaster
• Sequence 2: NP_001007013.2
• Gene: Alx3 / 365900
• RGDID: 1359270
• Length: 343
• Species: Rattus norvegicus
• Alignment Length: 243
• Identity: 79/243 - (32%)
• Similarity: 114/243 - (46%)
• Gaps: 36/243 - (14%)

  Fly   207 LQDSSP-VMINGGSAGGKLKKPDEMCSQLEAGGAGVTPPSSSSTVVNGTTNGTGNANSSSSAGVG 270
            |||..| .::|||.......:.:|..|:      ..:.|........|..:|..|
  Rat    72 LQDLGPGPVLNGGHFYKGSSEAEEKASK------AASFPQLPVDCRGGPRDGPSN---------- 120

  Fly   271 IQGAAG----TAGGVAAPAAKKDGSSSKKKGDPNGIKKKKTRTTFTAYQLEELERAFERAPYPDV 331
            :||:.|    :.....:|........:|.|.     ||::.||||:.:||||||:.|::..||||
  Rat   121 VQGSPGPCLASLSVPLSPGLPDSMELAKSKS-----KKRRNRTTFSTFQLEELEKVFQKTHYPDV 180

  Fly   332 FAREELAIKLNLSESRVQVWFQNRRAKWRKHEPPRKTGYIKTSTPPTATLNPGTLAPPFTSYP-- 394
            :|||:||::.:|:|:|||||||||||||||.|   :.|.|:....|..|....::.|...|:|
  Rat   181 YAREQLALRTDLTEARVQVWFQNRRAKWRKRE---RYGKIQEGRNPFTTAYDISVLPRTDSHPQL 242

  Fly   395 QTTTVTPPGSMDSWTSYQTPYELTPQFSLLSPAASPYGTYSGQYGAYV 442
            |.:..:.|||.........|.|..|     ||..|||....|....::
  Rat   243 QNSLWSSPGSGSPGGPCLMPPEGIP-----SPCMSPYSHSHGNVAGFM 285

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
repo	NP_477026.1	Homeodomain	313..361	CDD:459649	31/47 (66%)
Alx3	NP_001007013.2	Homeodomain	154..210	CDD:459649	35/55 (64%)