Protein Alignment repo and en

DIOPT Version :10

• Sequence 1: NP_477026.1
• Gene: repo / 47285
• FlyBaseID: FBgn0011701
• Length: 612
• Species: Drosophila melanogaster
• Sequence 2: NP_523700.2
• Gene: en / 36240
• FlyBaseID: FBgn0000577
• Length: 552
• Species: Drosophila melanogaster
• Alignment Length: 547
• Identity: 98/547 - (17%)
• Similarity: 149/547 - (27%)
• Gaps: 295/547 - (53%)

  Fly   107 SAP-------QKLVEQQQQQQHHHQHHQHYTATPPPSHNGILLHKQSSQQQQQQQQQLVGILDYH 164
            |||       |.|..||||||...|..||             || |..|.||..||||...:.:|
  Fly    11 SAPSPITLQMQHLHHQQQQQQQQQQQMQH-------------LH-QLQQLQQLHQQQLAAGVFHH 61

  Fly   165 P-------------------------LNGKLDYSSSPKDQYEP----------QQLQHLYGG-SP 193
            |                         |..:|..|.||.....|          ::...:.|. |.
  Fly    62 PAMAFDAAAAAAAAAAAAAAHAHAAALQQRLSGSGSPASCSTPASSTPLTIKEEESDSVIGDMSF 126

  Fly   194 HHLDHLDHGSDGLLQDSS-PVMINGGSAGGKLKKPD----------------------------- 228
            |:..|..:..:...:|.. .|.::..||||:|..|.
  Fly   127 HNQTHTTNEEEEAEEDDDIDVDVDDTSAGGRLPPPAHQQQSTAKPSLAFSISNILSDRFGDVQKP 191

  Fly   229 ---------------------------------EMCSQLEAGGAGVT------------------ 242
                                             |...|.:|..|..|
  Fly   192 GKSMENQASIFRPFEASRSQTATPSAFTRVDLLEFSRQQQAAAAAATAAMMLERANFLNCFNPAA 256

  Fly   243 ----------------------------------------------------------------- 242
                                                                             
  Fly   257 YPRIHEEIVQSRLRRSAANAVIPPPMSSKMSDANPEKSALGSLCKAVSQIGQPAAPTMTQPPLSS 321

  Fly   243 --------PPSSSSTVVNGTTNGTGNANSSSSAGVGIQ------------GAAGTAGGVAAP--- 284
                    ||:|:::.:: :|:....::||||:|....            ||:|:....::|
  Fly   322 SASSLASPPPASNASTIS-STSSVATSSSSSSSGCSSAASSLNSSPSSRLGASGSGVNASSPQPQ 385

  Fly   285 ------AAKKD-------------GSSSKKKGD-------------------------PNGIK-- 303
                  |..:|             ||::.:.|.                         |...|
  Fly   386 PIPPPSAVSRDSGMESSDDTRSETGSTTTEGGKNEMWPAWVYCTRYSDRPSSGPRYRRPKQPKDK 450

  Fly   304 ---KKKTRTTFTAYQLEELERAFERAPYPDVFAREELAIKLNLSESRVQVWFQNRRAKWRKHEPP 365
               :|:.||.|::.||..|:|.|....|.....|::|:.:|.|:|:::::||||:|||.:|
  Fly   451 TNDEKRPRTAFSSEQLARLKREFNENRYLTERRRQQLSSELGLNEAQIKIWFQNKRAKIKK---- 511

  Fly   366 RKTG--------------YIKTSTPPT 378
             .||              |..|:.|.|
  Fly   512 -STGSKNPLALQLMAQGLYNHTTVPLT 537

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
repo	NP_477026.1	Homeodomain	313..361	CDD:459649	18/47 (38%)
en	NP_523700.2	Homeodomain	455..511	CDD:459649	22/55 (40%)
		Engrail_1_C_sig	512..542	CDD:431338	6/26 (23%)