DRSC/TRiP Functional Genomics Resources

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Protein Alignment repo and eve

DIOPT Version :10

Sequence 1:NP_477026.1 Gene:repo / 47285 FlyBaseID:FBgn0011701 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_523670.2 Gene:eve / 36039 FlyBaseID:FBgn0000606 Length:376 Species:Drosophila melanogaster


Alignment Length:313 Identity:80/313 - (25%)
Similarity:108/313 - (34%) Gaps:99/313 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   189 YGGSPHHLDHLDHGSDGLLQDSSPVMINGGSAGGKLKKP---DEMCSQLEAGGAGVTPPSSSSTV 250
            |....||..|          |:|||.          :||   |.:.:|.   |...|||.|.:..
  Fly     7 YNMESHHAHH----------DASPVD----------QKPLVVDLLATQY---GKPQTPPPSPNEC 48

  Fly   251 VNGTTNGTGNANSSSSAGVGIQGAAGTAGGVAAPAAKKDGSSSKKKGDPNGIKKKKTRTTFTAYQ 315
            ::...|             .:.|:.|                |:...||:   .::.||.||..|
  Fly    49 LSSPDN-------------SLNGSRG----------------SEIPADPS---VRRYRTAFTRDQ 81

  Fly   316 LEELERAFERAPYPDVFAREELAIKLNLSESRVQVWFQNRRAKWRKHEPPRKTGYIKTSTPP--- 377
            |..||:.|.:..|.....|.|||.:|||.||.::|||||||.|.::........|....:.|   
  Fly    82 LGRLEKEFYKENYVSRPRRCELAAQLNLPESTIKVWFQNRRMKDKRQRIAVAWPYAAVYSDPAFA 146

  Fly   378 -----TATLNPGTLAPPF--------------TSYPQTTTVTPPGSMDSWTSYQTPYELTPQFSL 423
                 .|..:.|...||:              .:.|...|..||..|.     |.|....|..|.
  Fly   147 ASILQAAANSVGMPYPPYAPAAAAAAAAAAAVATNPMMATGMPPMGMP-----QMPTMQMPGHSG 206

  Fly   424 LSPAASPYGTYSGQYGAYVHESQLFP-------MRHYEYGSPTRMEMGATTGS 469
            .:...||||.|  :|..|...::..|       |.|     |..|...||..|
  Fly   207 HAGHPSPYGQY--RYTPYHIPARPAPPHPAGPHMHH-----PHMMGSSATGSS 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
repoNP_477026.1 Homeodomain 313..361 CDD:459649 23/47 (49%)
eveNP_523670.2 Homeodomain 71..127 CDD:459649 27/55 (49%)

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