Protein Alignment repo and Gsc

DIOPT Version :9

• Sequence 1: NP_477026.1
• Gene: repo / 47285
• FlyBaseID: FBgn0011701
• Length: 612
• Species: Drosophila melanogaster
• Sequence 2: NP_001137762.2
• Gene: Gsc / 33240
• FlyBaseID: FBgn0010323
• Length: 473
• Species: Drosophila melanogaster
• Alignment Length: 486
• Identity: 117/486 - (24%)
• Similarity: 165/486 - (33%)
• Gaps: 196/486 - (40%)

  Fly    66 PNGGGGGAGSGGAGGSPNYVTKLDFVNKMGCYSPSQ---KYEYISAPQKLVEQQQQQQHHHQHHQ 127
            |.|||||..:.....:|:             ..||:   |...:|.|.                .
  Fly     8 PGGGGGGTTTTTPSTTPD-------------IPPSKAKFKITVVSTPS----------------P 43

  Fly   128 HYTATPPPSHN-------------GILLHKQSSQ--QQQQQQQQLV----GILDYHPLNGKLDYS 173
            ....||||:.:             |..|.:..|.  :|||..:|:.    ....||.....|  .
  Fly    44 SPPPTPPPAGSMLAQMVETNSPPAGYTLKRSPSDLGEQQQPPRQISRSPGNTAAYHLTTAML--L 106

  Fly   174 SSPKDQYEPQQLQHLYGGSPHHLDH---------LDHGSDG---LLQDSSPVMINGGSAGGKLKK 226
            :|.:..|..|:||.:.  ...|..|         .|.||..   :|::..    .||:|...|..
  Fly   107 NSQQCGYLGQRLQSVL--QQQHAQHQQSQSQTPSSDDGSQSGVTILEEER----RGGAAAASLFT 165

  Fly   227 PDEMCSQLEAGGAGVTPPSSSSTVVNGTTNG-------------------TGNANSSSSAG---- 268
            .|.:....:.|| |..|...|....||..||                   :.|:||||||.
  Fly   166 IDSILGSRQQGG-GTAPSQGSHISSNGNQNGLTSNGISLGLKRSGAESPASPNSNSSSSAAASPI 229

  Fly   269 ---------------VGIQGAAGTAGGVAAPA----------------------------AKKDG 290
                           :|...||..:|..|:|:                            |...|
  Fly   230 RPQRVPAMLQHPGLHLGHLAAAAASGFAASPSDFLVAYPNFYPNYMHAAAVAHVAAAQMQAHVSG 294

  Fly   291 SSSKKKG------DPNG--------------------------IKKKKTRTTFTAYQLEELERAF 323
            :::...|      .|:|                          .:|::.||.||..|||:||..|
  Fly   295 AAAGLSGHGHHPHHPHGHPHHPHLGAHHHGQHHLSHLGHGPPPKRKRRHRTIFTEEQLEQLEATF 359

  Fly   324 ERAPYPDVFAREELAIKLNLSESRVQVWFQNRRAKWRK-----HEPPRK----------TGYIKT 373
            ::..||||..||:||:|::|.|.||:|||:||||||||     .|..||          .|...:
  Fly   360 DKTHYPDVVLREQLALKVDLKEERVEVWFKNRRAKWRKQKREEQERLRKLQEEQCGSTTNGTTNS 424

  Fly   374 STPPTATLNPGTLAPPFTSYPQTTTVTPPGS 404
            |:..|::...|:|           ||..|||
  Fly   425 SSGTTSSTGNGSL-----------TVKCPGS 444

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
repo	NP_477026.1	Homeobox	313..360	CDD:278475	27/46 (59%)
Gsc	NP_001137762.2	Homeobox	343..396	CDD:278475	31/52 (60%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45451025
Domainoid	1	1.000	55	1.000	Domainoid score	I4097
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000011
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR24329
Phylome	0	0.000	Not matched by this tool.
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R6207
SonicParanoid	0	0.000	Not matched by this tool.
	5	5.060