DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment repo and LOC3292406

DIOPT Version :10

Sequence 1:NP_477026.1 Gene:repo / 47285 FlyBaseID:FBgn0011701 Length:612 Species:Drosophila melanogaster
Sequence 2:XP_558008.5 Gene:LOC3292406 / 3292406 VectorBaseID:AGAMI1_004211 Length:275 Species:Anopheles gambiae


Alignment Length:59 Identity:39/59 - (66%)
Similarity:52/59 - (88%) Gaps:0/59 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   303 KKKKTRTTFTAYQLEELERAFERAPYPDVFAREELAIKLNLSESRVQVWFQNRRAKWRK 361
            ::::.|||||..||:|||:.|::..|||||.|||:|:::||||:|||||||||||||||
Mosquito    23 RQRRNRTTFTPQQLQELEQLFKKTHYPDVFLREEVALRINLSEARVQVWFQNRRAKWRK 81

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
repoNP_477026.1 Homeodomain 313..361 CDD:459649 32/47 (68%)
LOC3292406XP_558008.5 None

Return to query results.
Submit another query.