Protein Alignment repo and pax7a

DIOPT Version :10

• Sequence 1: NP_477026.1
• Gene: repo / 47285
• FlyBaseID: FBgn0011701
• Length: 612
• Species: Drosophila melanogaster
• Sequence 2: NP_571400.1
• Gene: pax7a / 30587
• ZFINID: ZDB-GENE-990415-201
• Length: 507
• Species: Danio rerio
• Alignment Length: 557
• Identity: 137/557 - (24%)
• Similarity: 204/557 - (36%)
• Gaps: 147/557 - (26%)

  Fly   133 PPPSHN----GILLHKQSSQQQQQQQQQLVGILDYHPLNGKLDYSSSPKDQYEPQQLQHLYGGSP 193
            |.|..|    |..| :.|:...|.:..||.|:.    :||:      |.    |..::|......
Zfish    14 PAPGQNYPRTGFPL-EVSTPLGQGRVNQLGGVF----INGR------PL----PNHIRHKIVEMA 63

  Fly   194 HH---------LDHLDHG--SDGLLQDSSPVMINGGSAGG----KLKKPD--------------- 228
            ||         ...:.||  |..|.:......|..|:.||    ::..||
Zfish    64 HHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGM 128

  Fly   229 ---EMCSQLEAGGA---GVTPPSSSSTVVN---------GTTNGTGNANSSSSAGV-----GIQG 273
               |:..:|...|.   |..|...:|:|.:         |..:.....:.....|.     .|.|
Zfish   129 FSWEIRDKLLKDGVCDRGTVPSGEASSVSSISRVLRARFGKKDDDDECDKKDEDGEKKTKHSIDG 193

  Fly   274 AAGTAGGVAAPAAKKDGSSSKKKGD-PNGIKKKKTRTTFTAYQLEELERAFERAPYPDVFAREEL 337
            ..|..|.     ...:||..:.:.| |...|::::||||||.||||||:||||..|||::.||||
Zfish   194 ILGDKGN-----RTDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREEL 253

  Fly   338 AIKLNLSESRVQVWFQNRRAKWRKHEPPRKTG----YIKTSTPPTATLNPGTLAPPFTSYPQTTT 398
            |.:..|:|:||||||.||||:|||.....:..    .:....|||......|...|.::||.||.
Zfish   254 AQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTGMPTLPTYQLPESTYPSTTL 318

  Fly   399 VTPPGSMDSWTSYQTPYELTP----QFSLLSPAASPYGTYSGQYGAYVHESQLFPMRHYEYGSPT 459
                 |.|..::...|..|.|    |..|.:.:.|.||..|.:: .:...|:.|.       |||
Zfish   319 -----SQDGSSTLHRPQPLPPSSMHQGGLSADSGSAYGLSSNRH-TFSSYSETFM-------SPT 370

  Fly   460 RMEMGATTGSVAGNGDESVANGGSYQTAELQTAQQQQLADGTLVTVHAHQQQQQQQQQLNGKYLS 524
                      .:.|....|:||.|.|...:            |....|...|.|....::..:..
Zfish   371 ----------ASSNHMNPVSNGLSPQVMSI------------LSNPSAVPSQPQHDFSISPLHGG 413

  Fly   525 AEEAKYVHLQCHQSGGGLE-----LSPGASCHLVEAQGQHYVTTATGG--AASAGGTSSDDNDSG 582
            .|.:..:...|.|....::     .|..:.|....:...:.|...|.|  .:..|.|:.|
Zfish   414 LEASNPISASCSQRSDPIKSVDSLASTQSYCPPTYSATSYSVDPVTAGYQYSQYGQTAVD----- 473

  Fly   583 GMQTVIKSEEVSQQQ--------------QQQQGQSY 605
               .:.|:..:|.|:              |.:.||:|
Zfish   474 ---YLAKNVSLSTQRRMKLGDHSAVLGLLQVETGQAY 507

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
repo	NP_477026.1	Homeodomain	313..361	CDD:459649	32/47 (68%)
pax7a	NP_571400.1	PAX	34..166	CDD:238076	28/145 (19%)
		Homeodomain	221..277	CDD:459649	37/55 (67%)
		Pax7	343..386	CDD:403540	14/60 (23%)