Protein Alignment repo and rx3

DIOPT Version :9

• Sequence 1: NP_477026.1
• Gene: repo / 47285
• FlyBaseID: FBgn0011701
• Length: 612
• Species: Drosophila melanogaster
• Sequence 2: NP_571302.1
• Gene: rx3 / 30474
• ZFINID: ZDB-GENE-990415-238
• Length: 292
• Species: Danio rerio
• Alignment Length: 279
• Identity: 88/279 - (31%)
• Similarity: 120/279 - (43%)
• Gaps: 70/279 - (25%)

  Fly   156 QLVGILDYHPLNGKLDYSS----SPKDQYEPQQLQHLYGGSPHHLDH--LDHGSDGLLQDSSPVM 214
            :||| ..|..:..:|..|:    ||..|.....::.:.|.....|.|  ..:||
Zfish     2 RLVG-SQYKDMEDRLSPSARLVRSPGSQTRIHSIESILGFKGETLFHPAFPYGS----------- 54

  Fly   215 INGGSAGGKLKKPDEMCSQLEAGGAGVTPPSSSSTVVNGTTNGTGNANSSSSAGVGIQGAAGTAG 279
                   ||..|..|..|          |...|:...:|....|
Zfish    55 -------GKTGKDTEHLS----------PKKDSNKHFDGVCRST--------------------- 81

  Fly   280 GVAAPAAKKDGSSSKKKGDPNGIKK-KKTRTTFTAYQLEELERAFERAPYPDVFAREELAIKLNL 343
             |.......|....|...|.|..|| ::.|||||.:||.|||||||::.||||::|||||:|:||
Zfish    82 -VMVSPDLPDADGGKLSDDENPKKKHRRNRTTFTTFQLHELERAFEKSHYPDVYSREELALKVNL 145

  Fly   344 SESRVQVWFQNRRAKWRKHEPPRKTGYIK------TSTPPTATLNPGTLAP--PFTSYPQTTTVT 400
            .|.||||||||||||||:.| ..:...||      .|.|.:..|:.|:..|  |:.:.|.:|:.:
Zfish   146 PEVRVQVWFQNRRAKWRRQE-KLEVSSIKLQESSMLSIPRSGPLSLGSGLPLEPWLTGPISTSSS 209

  Fly   401 PPGSMDSWTSYQTPYELTP 419
            |   :.|..|:.||.:..|
Zfish   210 P---LQSLPSFITPQQAVP 225

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
repo	NP_477026.1	Homeobox	313..360	CDD:278475	34/46 (74%)
rx3	NP_571302.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..27		8/25 (32%)
		Octapeptide motif	32..39		0/6 (0%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	53..72		9/46 (20%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	85..107		6/21 (29%)
		Homeobox	110..162	CDD:278475	39/51 (76%)
		OAR	268..284	CDD:281777
		OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138	272..285
		Nuclear localization signal. /evidence=ECO:0000255	278..282

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000011
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.910