DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment repo and rx2

DIOPT Version :9

Sequence 1:	NP_477026.1	Gene:	repo / 47285	FlyBaseID:	FBgn0011701	Length:	612	Species:	Drosophila melanogaster
Sequence 2:	NP_571301.2	Gene:	rx2 / 30473	ZFINID:	ZDB-GENE-990415-237	Length:	327	Species:	Danio rerio

Alignment Length:	140	Identity:	66/140 - (47%)
Similarity:	81/140 - (57%)	Gaps:	18/140 - (12%)

- Green bases have known domain annotations that are detailed below.

  Fly   303 KKKKTRTTFTAYQLEELERAFERAPYPDVFAREELAIKLNLSESRVQVWFQNRRAKWRKHEPPRK 367
            |.::.|||||.|||.|||||||::.||||::|||||:|:||.|.||||||||||||||:.| ...
Zfish   134 KHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQE-KMD 197

  Fly   368 TGYIKTSTPPTATLNPGTLAP------------PFTSYPQTTTVTP----PGSMDSWTSYQTPYE 416
            ||.:|....|..:.|...:||            |:.|.| .::.||    ||.|....|.|..|.
Zfish   198 TGTMKLHDSPIRSFNRPPMAPNVGPMSNSLPLDPWLSSP-LSSATPMHSIPGFMGPGQSLQPTYT 261

  Fly   417 LTPQFSLLSP 426
            ..|.|...||
Zfish   262 AHPGFLNTSP 271

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
repo	NP_477026.1	Homeobox	313..360	CDD:278475	35/46 (76%)
rx2	NP_571301.2	Octapeptide motif	37..44
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	48..73
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	100..139		1/4 (25%)
		Homeobox	139..191	CDD:278475	40/51 (78%)
		OAR	302..316	CDD:281777
		OAR. /evidence=ECO:0000255\|PROSITE-ProRule:PRU00138	304..317
		Nuclear localization signal. /evidence=ECO:0000255	310..314
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000011
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
ZFIN	0	0.000	Not matched by this tool.
	3	2.870