Protein Alignment repo and Pitx3

DIOPT Version :10

• Sequence 1: NP_477026.1
• Gene: repo / 47285
• FlyBaseID: FBgn0011701
• Length: 612
• Species: Drosophila melanogaster
• Sequence 2: NP_062120.1
• Gene: Pitx3 / 29609
• RGDID: 3332
• Length: 302
• Species: Rattus norvegicus
• Alignment Length: 226
• Identity: 72/226 - (31%)
• Similarity: 99/226 - (43%)
• Gaps: 63/226 - (27%)

  Fly   253 GTTNGTGNANSSSSAGV--------GIQG---------AAGTAGGVAAPAAKKDGSSSKKKGDPN 300
            |.......|.|.|.||.        |.:|         :|...||     :.:|||..|
  Rat     7 GEAEARSPALSLSDAGTPHPPLPEHGCKGQEHSDSEKASASLPGG-----SPEDGSLKK------ 60

  Fly   301 GIKKKKTRTTFTAYQLEELERAFERAPYPDVFAREELAIKLNLSESRVQVWFQNRRAKWRKHE-- 363
              |:::.||.||:.||:|||..|:|..|||:..|||:|:..||:|:||:|||:||||||||.|
  Rat    61 --KQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERS 123

  Fly   364 ------------------PPRK---TGYIKTSTPPTATLNPGTLAPPFT--SYPQTTTVTPPGSM 405
                              ||.:   .||...:.||.|      ||||..  ::|........|.:
  Rat   124 QQAELCKGGFAAPLGGLVPPYEEVYPGYTYGNWPPKA------LAPPLAAKTFPFAFNSVNVGPL 182

  Fly   406 DSWTSYQTPYELTPQFSLLSPAASPYGTYSG 436
            .|...:..|..:..  |::..||:..||..|
  Rat   183 ASQPVFSPPSSIAA--SMVPSAAAAPGTVPG 211

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
repo	NP_477026.1	Homeodomain	313..361	CDD:459649	28/47 (60%)
Pitx3	NP_062120.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..71		19/76 (25%)
		Homeodomain	63..119	CDD:459649	32/55 (58%)
		PTZ00395	<142..>236	CDD:185594	21/78 (27%)
		OAR	258..275	CDD:461067
		OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138	262..275
		Nuclear localization signal. /evidence=ECO:0000255	268..272