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Protein Alignment repo and sebox
DIOPT Version :9
Sequence 1: | NP_477026.1 |
Gene: | repo / 47285 |
FlyBaseID: | FBgn0011701 |
Length: | 612 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001306981.1 |
Gene: | sebox / 282666 |
ZFINID: | ZDB-GENE-021206-4 |
Length: | 293 |
Species: | Danio rerio |
Alignment Length: | 141 |
Identity: | 48/141 - (34%) |
Similarity: | 65/141 - (46%) |
Gaps: | 26/141 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 295 KKGDPNGIKKKKTRTTFTAYQLEELERAFERAPYPDVFAREELAIKLNLSESRVQVWFQNRRAKW 359
:.|...|.:|:| ||.|:..||.||||||...||||:..||.||....|.||::|||||||||:.
Zfish 50 RTGHVEGQRKRK-RTIFSRAQLSELERAFMITPYPDITLRERLAALTLLPESKIQVWFQNRRARS 113
Fly 360 RKHE----PPRKTGYIKTSTPPTATLNPGTLAPPFTSYPQTTTVTPPGSMDSWTSYQTPYELTPQ 420
.|.: |..:....|..|.| .::|.......|.:..|...:|.
Zfish 114 MKSKKLITPVSRRSPAKDCTFP-------------ATHPDLNLEQSPEANKSLRHHQQ------- 158
Fly 421 FSLLSPAASPY 431
||:..|.:|:
Zfish 159 -SLIRQALNPW 168
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR24329 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
2 | 2.010 |
|
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