Sequence 1: | NP_477026.1 | Gene: | repo / 47285 | FlyBaseID: | FBgn0011701 | Length: | 612 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_055291.2 | Gene: | PDLIM3 / 27295 | HGNCID: | 20767 | Length: | 364 | Species: | Homo sapiens |
Alignment Length: | 276 | Identity: | 54/276 - (19%) |
---|---|---|---|
Similarity: | 88/276 - (31%) | Gaps: | 96/276 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 340 KLNL-SESRVQVWFQNRRAKWRKHE--------PPRKTGYIKTSTPPTATLNPGTLAPPFTSYPQ 395
Fly 396 TTTVTP-------------------PGSMDSWTSYQTPYELTPQFSLLSPAASPYGTYSGQ---- 437
Fly 438 ---YGAYVHESQLFPMRHYEYGSPTRMEMGAT----TGSVAGNGDESVA------------NGGS 483
Fly 484 YQTAELQTAQQQQLAD--GTLVTVHAHQQQQQQQQQLNGKYLSAEEAKYVHLQCHQSGGGLELSP 546
Fly 547 GASCHL-VEAQGQHYV 561 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
repo | NP_477026.1 | Homeobox | 313..360 | CDD:278475 | 6/20 (30%) |
PDLIM3 | NP_055291.2 | PDZ_signaling | 2..80 | CDD:238492 | |
DUF4749 | 184..263 | CDD:374237 | 13/78 (17%) | ||
LIM_ALP | 294..346 | CDD:188834 | 12/67 (18%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R6207 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.030 |