powered by:
Protein Alignment repo and LHX6
DIOPT Version :9
Sequence 1: | NP_477026.1 |
Gene: | repo / 47285 |
FlyBaseID: | FBgn0011701 |
Length: | 612 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_011516823.1 |
Gene: | LHX6 / 26468 |
HGNCID: | 21735 |
Length: | 407 |
Species: | Homo sapiens |
Alignment Length: | 142 |
Identity: | 43/142 - (30%) |
Similarity: | 66/142 - (46%) |
Gaps: | 15/142 - (10%) |
- Green bases have known domain annotations that are detailed below.
Fly 271 IQGAAGTAGGVAAPAAKKDGSSSKKKGDPNGIKKKKTRTTFTAYQLEELERAFERAPYPDVFARE 335
::.||....|:....|......|:.| ..|:.||:|||.||:.::..|.:...||....:
Human 221 LKRAAENGNGLTLEGAVPSEQDSQPK------PAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQ 279
Fly 336 ELAIKLNLSESRVQVWFQNRRAKWRKHEPPRKTGYIKTSTPPTATLNPGTLA-----PPFTSYPQ 395
:||....||...:||||||.||:.:||.|... :..|..|.:.| |..|: .||:|..:
Human 280 KLADMTGLSRRVIQVWFQNCRARHKKHTPQHP---VPPSGAPPSRL-PSALSDDIHYTPFSSPER 340
Fly 396 TTTVTPPGSMDS 407
...||..|.:::
Human 341 ARMVTLHGYIET 352
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R6207 |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
User_Submission |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.940 |
|
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