Protein Alignment repo and ceh-54

DIOPT Version :10

• Sequence 1: NP_477026.1
• Gene: repo / 47285
• FlyBaseID: FBgn0011701
• Length: 612
• Species: Drosophila melanogaster
• Sequence 2: NP_001338798.1
• Gene: ceh-54 / 188474
• WormBaseID: WBGene00020485
• Length: 221
• Species: Caenorhabditis elegans
• Alignment Length: 161
• Identity: 51/161 - (31%)
• Similarity: 80/161 - (49%)
• Gaps: 4/161 - (2%)

  Fly   294 KKKGDPNGIKKKKTRTTFTAYQLEELERAFERAPYPDVFAREELAIKLNLSESRVQVWFQNRRAK 358
            |:..:.|..:||:.|.||.|.|::|:|:.|....|||..:||:||.|:.|.|.|||:||||||||
 Worm    35 KRSNNFNPDRKKRNRITFDANQIDEMEKVFAENQYPDTMSREKLANKIQLHEERVQIWFQNRRAK 99

  Fly   359 WRKHEPPRKTGYIKTSTPPTATLNPGTLAPPFTSYPQTTTVTPPGSMDSWTSYQTPYELTPQFSL 423
            :|:.:  ::||:  ...||:.|.||.............|:.:.||..:.........|:.|:...
 Worm   100 YRREQ--KQTGH--PYEPPSITKNPTGEKEKTQDCTTLTSASSPGPSNLSNDTLVSIEMAPKIGT 160

  Fly   424 LSPAASPYGTYSGQYGAYVHESQLFPMRHYE 454
            .|....|....|......::.::.....:||
 Worm   161 KSVNLFPDQALSNTLNMIINANKNASENNYE 191

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
repo	NP_477026.1	Homeodomain	313..361	CDD:459649	26/47 (55%)
ceh-54	NP_001338798.1	Homeodomain	46..102	CDD:459649	30/55 (55%)