Protein Alignment repo and dsc-1

DIOPT Version :10

• Sequence 1: NP_477026.1
• Gene: repo / 47285
• FlyBaseID: FBgn0011701
• Length: 612
• Species: Drosophila melanogaster
• Sequence 2: NP_510497.1
• Gene: dsc-1 / 181599
• WormBaseID: WBGene00001096
• Length: 310
• Species: Caenorhabditis elegans
• Alignment Length: 272
• Identity: 73/272 - (26%)
• Similarity: 106/272 - (38%)
• Gaps: 93/272 - (34%)

  Fly   115 QQQQQQHHHQHH--------------QHYTATPPPS---HN-GILLHKQSSQQQQQQQQQLVGIL 161
            ||..||.|...:              ||  |..||:   || |:.||.......|
 Worm    38 QQGAQQFHPPRNLGPQLARRWSCGDSQH--ADEPPASYYHNLGVALHNHFQMSNQ---------- 90

  Fly   162 DYHPLNGKLDY----SSSP-KDQYEPQQLQHLYGGSPHHLDHLDHGSDGLLQDSSPVMINGGSAG 221
              |.|:   |:    :.|| ...:|..||..|   ||:  ||:.:      ||  |.|.:..:.|
 Worm    91 --HYLS---DFDCPTTVSPISSAHETGQLPQL---SPY--DHIGN------QD--PHMFSPHAYG 137

  Fly   222 GKLKKPDEMCSQLEAGGAGVTPPSSSSTVVNGTTNGTGNANSSSSAGVGIQGAAGTAGGVAAPAA 286
            ..: .||.  |..|.....::.|:..::.:|.:...:.||.|              .||
 Worm   138 NSM-IPDN--SYFENASRSISAPNVGNSTLNPSLMSSDNAQS--------------CGG------ 179

  Fly   287 KKDGSSSKKKGDPNGIKKKKTRTTFTAYQLEELERAFERAPYPDVFAREELAIKLNLSESRVQVW 351
                             :::.||.||..|...||.:|:.:.|||..|::.:|..|.:.|.|:.||
 Worm   180 -----------------RRRFRTNFTELQSTFLEDSFKESHYPDHKAKKYMADFLKIPEDRITVW 227

  Fly   352 FQNRRAKWRKHE 363
            |||||||||:.|
 Worm   228 FQNRRAKWRRKE 239

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
repo	NP_477026.1	Homeodomain	313..361	CDD:459649	22/47 (47%)
dsc-1	NP_510497.1	Homeodomain	181..237	CDD:459649	26/55 (47%)