Sequence 1: | NP_477026.1 | Gene: | repo / 47285 | FlyBaseID: | FBgn0011701 | Length: | 612 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006497796.1 | Gene: | Lhx2 / 16870 | MGIID: | 96785 | Length: | 414 | Species: | Mus musculus |
Alignment Length: | 411 | Identity: | 102/411 - (24%) |
---|---|---|---|
Similarity: | 147/411 - (35%) | Gaps: | 113/411 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 60 DCNTILPN-GGGGGAGSGGAGG--SPNYV-----------------TKLDFVNKMGCYSPSQ--- 101
Fly 102 -KYEYISAPQKLVEQQQQQQHHHQHHQHYTATPPPSHNGILLHKQSSQQQQQQQQQLVGILDYHP 165
Fly 166 LN-------GKL----DYSSSPKDQYEPQQLQH---LYGGSPHHLDHLDHGSDGLLQDSSPVMIN 216
Fly 217 GGSAGGKLKKPDEMCSQLEAGGAGVTPPSSSSTVVNGTTNGT---GNANSSSSAGVGIQGAAGTA 278
Fly 279 GGVAAPAAKKDGSS-SKKKGDPNGIKKKKTRTTFTAYQLEELERAFERAPYPDVFAREELAIKLN 342
Fly 343 LSESRVQVWFQNRRAKWRKH-EPPRKTGYIKTS-------TP--PTATLNPGTLAPPFT------ 391
Fly 392 -SYPQTTTVTP-----PGSMD 406 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
repo | NP_477026.1 | Homeobox | 313..360 | CDD:278475 | 18/46 (39%) |
Lhx2 | XP_006497796.1 | LIM1_Lhx2 | 43..106 | CDD:188853 | 12/62 (19%) |
LIM2_Lhx2_Lhx9 | 119..177 | CDD:188763 | 15/68 (22%) | ||
COG5576 | <255..386 | CDD:227863 | 39/130 (30%) | ||
Homeobox | 278..331 | CDD:395001 | 21/52 (40%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |