DRSC/TRiP Functional Genomics Resources

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Protein Alignment repo and LOC1281689

DIOPT Version :10

Sequence 1:NP_477026.1 Gene:repo / 47285 FlyBaseID:FBgn0011701 Length:612 Species:Drosophila melanogaster
Sequence 2:XP_321639.6 Gene:LOC1281689 / 1281689 VectorBaseID:AGAMI1_013275 Length:436 Species:Anopheles gambiae


Alignment Length:470 Identity:127/470 - (27%)
Similarity:180/470 - (38%) Gaps:166/470 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 PDCNTILPNGGGGGAGSGGAGG---------SPNYVTKLDFVNKMGCYSPSQKYEYISAPQKLVE 114
            |..|..||. ||..|..||..|         ||:..:           .||.:| |..|.:..:.
Mosquito    62 PVPNDALPL-GGSAASDGGTSGVIEPSCSNVSPSISS-----------DPSGRY-YDEAGELSIT 113

  Fly   115 QQQQQQHHHQH---HQHYTATPPPSHNGILLHKQSSQQQQQQQQQLVGILDYHPLNGKLDYSSSP 176
            ......|||.|   |||:|.....|:|.:|:.:..|                 ||          
Mosquito   114 TGHPHHHHHHHTHTHQHHTHHHQFSNNRLLMGEHRS-----------------PL---------- 151

  Fly   177 KDQYEPQQLQHLYGGSPHHLDHLDHGSDGLLQDSSPVMINGGSAGGKLKKPDEMCSQLEAGGAGV 241
                       :|.||     :::.|..||       .|.|                 |:|.:|:
Mosquito   152 -----------IYEGS-----NVELGFGGL-------NIEG-----------------ESGTSGL 176

  Fly   242 T-PPSSSSTVVNGTTNGTG-----------NANSSSSAGVGIQGAAGT---AGGVAAPAAKKD-G 290
            | |.::::|.|:...:..|           ..||:||..    .::.|   .|..::|..|.| .
Mosquito   177 TNPGAAAATSVDKKVHHGGVKDRFLMSNLLQLNSTSSTA----DSSRTMMPPGSPSSPVDKDDLE 237

  Fly   291 SSSKKKGDPN------GIKK-KKTRTTFTAYQLEELERAFERAPYPDVFAREELAIKLNLSESRV 348
            .:...|.|.:      .:|| ::.|||||..||..||:.||:..|||.|.|||||.|:.|||:||
Mosquito   238 DTPTHKSDLSMRTKSCTLKKPRRNRTTFTTNQLTALEKIFEKTHYPDAFVREELANKVGLSEARV 302

  Fly   349 QVWFQNRRAKWRKHE-PPRKTGYIKTSTPPTATLNPGTLAPPFTSYPQTTTVTPPGSMDSWTSY- 411
            ||||||||||:|::| ..:.:|...:::......:||.:.|..||          |.:..:... 
Mosquito   303 QVWFQNRRAKFRRNERSAQSSGGGGSASKGEDFFHPGAIPPSATS----------GGLAGFAGVV 357

  Fly   412 ----QTPYELTPQFSLLSPAASPYGTYSGQYGAYVHESQLFPMRHYEYGSPTRMEMGATTGSVAG 472
                ..||.|:  ||.||...||.            .|||  ..|:.:..|           .||
Mosquito   358 DKPDSGPYSLS--FSTLSSIFSPV------------VSQL--QHHHAHHHP-----------AAG 395

  Fly   473 NGDESVANGGSYQTA 487
                ||..||.:.||
Mosquito   396 ----SVRAGGQFYTA 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
repoNP_477026.1 Homeodomain 313..361 CDD:459649 31/47 (66%)
LOC1281689XP_321639.6 None

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