Protein Alignment repo and LOC1281580

DIOPT Version :10

• Sequence 1: NP_477026.1
• Gene: repo / 47285
• FlyBaseID: FBgn0011701
• Length: 612
• Species: Drosophila melanogaster
• Sequence 2: XP_321511.3
• Gene: LOC1281580 / 1281580
• VectorBaseID: AGAMI1_009381
• Length: 319
• Species: Anopheles gambiae
• Alignment Length: 249
• Identity: 80/249 - (32%)
• Similarity: 108/249 - (43%)
• Gaps: 47/249 - (18%)

  Fly   144 KQSS---QQQQQQQQQLVGILDYHPLNGKLDYSSSPKDQ----------YEPQQLQHLYGGSPHH 195
            |:||   .||||||.:.:|..........|...:.|...          .....:.|..|..|.|
Mosquito    16 KESSTDHHQQQQQQHEDMGCSSAGSTGTTLPTDARPSFASVFTIESILGLNQDSIAHKAGAGPLH 80

  Fly   196 LDHLDHGSDGLLQDSSPV--MINGGSAGGKLKK--PDEMCSQLEAGGAGV--TPPSSSSTVVNGT 254
                    |.||   |||  .::||:| .:|::  ...:.:.....|||.  .|.|..|......
Mosquito    81 --------DKLL---SPVPQRLDGGAA-YELEQHTKQSLSNYFRCAGAGTLHLPASHQSDANMLP 133

  Fly   255 TNGTGNANSSS----------SAGVGIQGAAGTAGGVAAPAAKKDGSSSKKKGDPNGIKKKKTRT 309
            ||..|.|..||          :|.:..|.......|...|......:.|..|      :|::.||
Mosquito   134 TNILGIAYPSSCHNYLQPDLFAAHLHQQVGLVACNGNFRPRYPFLNADSHIK------RKRRHRT 192

  Fly   310 TFTAYQLEELERAFERAPYPDVFAREELAIKLNLSESRVQVWFQNRRAKWRKHE 363
            .||..|||:||..|::..||||..||:||||::|.|.||:|||:||||||||.:
Mosquito   193 IFTEEQLEQLEATFDKTHYPDVLLREKLAIKVDLKEERVEVWFKNRRAKWRKQK 246

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
repo	NP_477026.1	Homeodomain	313..361	CDD:459649	29/47 (62%)
LOC1281580	XP_321511.3	Homeodomain	188..244	CDD:459649	33/55 (60%)